Pairwise Alignments

Query, 274 a.a., Probable sugar-transport integral membrane protein ABC transporter SugB from Mycobacterium tuberculosis H37Rv

Subject, 278 a.a., Various polyols ABC transporter, permease protein 2 from Variovorax sp. SCN45

 Score =  121 bits (303), Expect = 2e-32
 Identities = 76/266 (28%), Positives = 141/266 (53%), Gaps = 9/266 (3%)

Query: 9   WAVLDTLVVGYALLPVLWIFSLSLKPT-STVKDGKLIPSTVTFDNYRGIFRGDLFSSALI 67
           WAV  TLV+ +   P+ W+F  + K     +    L     T DN+  + R   +     
Sbjct: 21  WAV--TLVLFF---PLGWLFLTAFKTELQAISVPPLFIFEPTLDNFGEVQRRSDYLLYAR 75

Query: 68  NSIGIGLITTVIAVVLGAMAAYAVARLEFPGKRLLIGAALLITMFPSISLVTPLFNIERA 127
           NS+   L +T++ +++ A AAY++A       R ++   L   M P++  + P++ + + 
Sbjct: 76  NSLITSLGSTILGLLIAAPAAYSMAFFRTKKTRDILMWMLSTKMMPAVGALVPIYVLAQT 135

Query: 128 IGLFDTWPGLILPYITFALPLAIYTLSAFFREIPWDLEKAAKMDGATPGQAFRKVIVPLA 187
            G+ D+ P L + +    LP+ ++ L + +++IP ++ +AA+MDGA+    FR V++PL+
Sbjct: 136 AGMLDSLPALTIVFTLSNLPIMVWMLYSAYKDIPNEILEAARMDGASLWTEFRHVVLPLS 195

Query: 188 APGLVTAAILVFIFAWNDLLLALSLTATKAAITAPVAIANFTGSSQFEEPTGSIAAGAIV 247
             GL +  +L  + +WN+   AL+LT+ KA   A +  +  +    F      ++A +++
Sbjct: 196 VGGLASTGLLCLVLSWNEAFWALNLTSAKAGTLATLIASYSSPEGLF---WAKLSAASLM 252

Query: 248 ITIPIIVFVLIFQRRIVAGLTSGAVK 273
              PI+VF    Q+++V GLT GAVK
Sbjct: 253 AIAPIVVFGWFSQKQLVQGLTFGAVK 278