Pairwise Alignments

Query, 274 a.a., Probable sugar-transport integral membrane protein ABC transporter SugB from Mycobacterium tuberculosis H37Rv

Subject, 283 a.a., carbohydrate ABC transporter permease from Variovorax sp. OAS795

 Score =  138 bits (347), Expect = 2e-37
 Identities = 87/265 (32%), Positives = 139/265 (52%), Gaps = 11/265 (4%)

Query: 16  VVGYALLPV--LWIFSLSLKPTSTVKDGKLIPSTVTFDNYRGIFRG-----DLFSSALIN 68
           V+ + L+PV  + +F++S K ++T   G L P   T DN+R +F+      D F   L N
Sbjct: 22  VLLWTLVPVYHMVLFAISSKDSAT--SGHLWPKNPTLDNFRIVFQQKHFYLDHFWLQLWN 79

Query: 69  SIGIGLITTVIAVVLGAMAAYAVARLEFPGKRLLIGAALLITMFPSISLVTPLFNIERAI 128
           S+ I +    I + +   AA+A++RL   G R ++  AL     P+  L  P++      
Sbjct: 80  SLLIAVSVGAITLFVATTAAFAISRLRVRGGRTVMNLALFTYFIPAAFLAVPMYKTMGNY 139

Query: 129 GLFDTWPGLILPYITFALPLAIYTLSAFFREIPWDLEKAAKMDGATPGQAFRKVIVPLAA 188
           GL ++   LIL  +T A P  I+ L     ++P++L++AA+MDGA+P Q FR V +PL  
Sbjct: 140 GLLNSQWALILAMVTIASPYCIWVLKQASDKLPYELDEAARMDGASPLQLFRLVYLPLMV 199

Query: 189 PGLVTAAILVFIFAWNDLLLALSLTATKAAITAPVAIANFTGSSQFEEPTGSIAAGAIVI 248
           P LV       + AWN+ L A  L +   ++T  VA+ NF  +   + P   + A  ++ 
Sbjct: 200 PSLVAVGTYSLLLAWNEYLYAFLLLSNDRSVTLAVALGNFLSAD--DSPWELLMATGLIY 257

Query: 249 TIPIIVFVLIFQRRIVAGLTSGAVK 273
            +P       F+R +V GLT+GAVK
Sbjct: 258 ALPPAAIYYAFKRYMVGGLTAGAVK 282