Pairwise Alignments

Query, 274 a.a., Probable sugar-transport integral membrane protein ABC transporter SugB from Mycobacterium tuberculosis H37Rv

Subject, 275 a.a., carbohydrate ABC transporter permease from Dickeya dianthicola ME23

 Score =  134 bits (338), Expect = 2e-36
 Identities = 80/271 (29%), Positives = 142/271 (52%), Gaps = 12/271 (4%)

Query: 5   RATYW-----AVLDTLVVGYALLPVLWIFSLSLKPTSTVKD--GKLIPSTVTFDNYRGIF 57
           R  YW     A+  T+ + +  LP+LW+ + + K T+          P   T  + + + 
Sbjct: 2   RLPYWLTALRALALTVALLFFTLPILWMAATAFKSTAEFASLSSPFWPQQWTLTHLKSLL 61

Query: 58  RGDLFSSALINSIGIGLITTVIAVVLGAMAAYAVARLEFPGK--RLLIGAALLITMFPSI 115
              +  + L N++ +    T ++++ G +AAY +AR  FP +   L +   LL+ M P +
Sbjct: 62  DSGV-GARLFNTLRVAAGATALSLLTGFLAAYTLARHRFPARLDSLFLLLVLLVKMMPPM 120

Query: 116 SLVTPLFNIERAIGLFDTWPGLILPYITFALPLAIYTLSAFFREIPWDLEKAAKMDGATP 175
            +  PL+++ +++ L ++  GL+L Y  + LP  I+ L +F R++P  LE+AA MDGA  
Sbjct: 121 VVAIPLYSLLKSLHLLNSLTGLMLAYQVYTLPFCIWMLLSFIRDVPLSLEEAAAMDGAGL 180

Query: 176 GQAFRKVIVPLAAPGLVTAAILVFIFAWNDLLLALSLTATKAAITAPVAIANFTGSSQFE 235
            +  R +++P+ APGLV  AI   I AWN+ L AL    T    T P+ IANF   +Q  
Sbjct: 181 WRRLRYIVLPVCAPGLVATAIFTLIMAWNEFLFALLYLQTPQQFTLPLFIANFMTENQIY 240

Query: 236 EPTGSIAAGAIVITIPIIVFVLIFQRRIVAG 266
              G + +  ++ ++P+++     QR ++ G
Sbjct: 241 --WGELMSIGLLSSLPVLLVAGFVQRYLLRG 269