Pairwise Alignments

Query, 274 a.a., Probable sugar-transport integral membrane protein ABC transporter SugB from Mycobacterium tuberculosis H37Rv

Subject, 271 a.a., carbohydrate ABC transporter permease from Dickeya dianthicola ME23

 Score =  141 bits (355), Expect = 2e-38
 Identities = 82/267 (30%), Positives = 143/267 (53%), Gaps = 3/267 (1%)

Query: 8   YWAVLDTLVVGYALLPVLWIFSLSLKPTSTVKDGKL-IPSTVTFDNYRGIFRGDLFSSAL 66
           +W VL  +V    +LP       S K  + +  G   +PS    DNY   ++   F+   
Sbjct: 7   FWRVLIWIVALMTVLPFGLALMTSFKTQTELFQGIFTLPSRFNLDNYLTAWQQGHFNLYF 66

Query: 67  INSIGIGLITTVIAVVLGAMAAYAVARLEFPGKRLLIGAALLITMFPSISLVTPLFNIER 126
           +NSI + +   + +++LG ++ +  A L  PGKRL   A  L  + PS + + PL++   
Sbjct: 67  MNSILVVVPVVISSLLLGILSGFGFAFLRIPGKRLFAAALALGMVLPSEAFIIPLYHELH 126

Query: 127 AIGLFDTWPGLILPYITFALPLAIYTLSAFFREIPWDLEKAAKMDGATPGQAFRKVIVPL 186
            +GL +++  LILP +  ++P A   +++ F+++P +L +A+ MDGA   +    ++VP 
Sbjct: 127 WLGLTNSYLALILPQVALSMPFATLMIASAFQQVPRELLEASVMDGAPRLKILWGILVPA 186

Query: 187 AAPGLVTAAILVFIFAWNDLLLALSLTATKAAITAPVAIANFTGSSQFEEPTGSIAAGAI 246
             P L T A+L+FI+ WN+ L+ L L       T P+ +  F   +    P   + AGA+
Sbjct: 187 IWPMLSTLALLLFIWTWNEFLIPLILVNRDELRTLPIGMMFFQNKNTINIPV--LMAGAM 244

Query: 247 VITIPIIVFVLIFQRRIVAGLTSGAVK 273
           ++ +P+I   L FQR+ ++G+T GAVK
Sbjct: 245 IVILPLIAIFLCFQRKFISGVTEGAVK 271