Pairwise Alignments

Query, 274 a.a., Probable sugar-transport integral membrane protein ABC transporter SugB from Mycobacterium tuberculosis H37Rv

Subject, 274 a.a., sorbitol/mannitol ABC transporter permease from Agrobacterium fabrum C58

 Score =  124 bits (311), Expect = 2e-33
 Identities = 88/282 (31%), Positives = 146/282 (51%), Gaps = 20/282 (7%)

Query: 3   ARRATYWAVLDTLVVGYAL-----LPVLWIFSLSLKPTSTVKDG-KLIPSTVTFDNYRGI 56
           AR+ T  A +   +  +A+      P+L+ F  S+K       G  LIPS  T +NY  +
Sbjct: 2   ARKTTTRAKIGFTIAAWAVALLLFFPILYAFLTSIKTEPEAIAGFSLIPSG-TLENYITV 60

Query: 57  FRGDLFSSALINSIGIGLITTVIAVVLGAMAAYAVARLEFPGKRLLIGAALLITMFPSIS 116
                +    +NS+ + L +T+IA+++   AA+A+A       + ++   L   M P ++
Sbjct: 61  QTQRDYFKPFMNSVVLSLGSTIIALMIAIPAAWAMAFSPTKRTKDILMWMLSTKMMPGVA 120

Query: 117 LVTPLFNIERAIGLFDTWPGLILPYITFALPLAIYTLSAFFREIPWDLEKAAKMDGATPG 176
           ++ P++ I R  GL DT  GL +      LP+ ++ L  +FREIP ++ +AA+MDGA+  
Sbjct: 121 VLVPIYLIFRNAGLLDTRIGLTVMLTFINLPIVVWMLYTYFREIPGEILEAARMDGASLW 180

Query: 177 QAFRKVIVPLAAPGLVTAAILVFIFAWNDLLLALSLTATKAA-ITAPVAIANFTGSSQFE 235
                V+ P+A PG+ +  +L  I AWN+    + LT T AA +TA +A         F 
Sbjct: 181 NEIVHVLTPMAVPGIASTLLLNVILAWNESFWTIRLTTTNAAPLTAFIA--------SFS 232

Query: 236 EPTG----SIAAGAIVITIPIIVFVLIFQRRIVAGLTSGAVK 273
            P G     ++A +++   PI+V     Q+++V GLT GAVK
Sbjct: 233 SPQGLFWAKLSAASMMAIAPILVIGWFSQKQLVRGLTFGAVK 274