Pairwise Alignments

Query, 307 a.a., Probable sugar-transport integral membrane protein ABC transporter SugA from Mycobacterium tuberculosis H37Rv

Subject, 331 a.a., sugar ABC transporter permease from Serratia liquefaciens MT49

 Score =  219 bits (557), Expect = 9e-62
 Identities = 123/296 (41%), Positives = 180/296 (60%), Gaps = 15/296 (5%)

Query: 14  SRTGSRMAERRLAFMLVAPAAMLMVAVTAYPIGYALWLSLQRNNLATPNDTAFIGLGNY- 72
           S+   +    R+A++LVAPA +L+  V  +P+   L+ S     L  P+D  F+G  NY 
Sbjct: 26  SKLNHQQRRSRIAWLLVAPAMLLLAVVAGWPLLRTLFYSFTDAMLDAPDDYRFVGFANYL 85

Query: 73  --------HTILIDRYWWTALAVTLAITAVSVTIEFVLGLALALVMHRTLIGKGLVRTAV 124
                   + +L D  WW A+  TL  + +SV++E V G+ LAL+M++   G+GLVRTA+
Sbjct: 86  DLTEGGHHYGVLADPLWWLAVGNTLRFSLLSVSLELVFGMLLALLMNQKFRGQGLVRTAI 145

Query: 125 LIPYGIVTVVASYSWYYAWTPGTGYLANLLPYDS------APLTQQIPSLGIVVIAEVWK 178
           L+P+ I T+V++  W + +    G + +LL          A + +   S+  VVIA+VWK
Sbjct: 146 LVPWAIPTIVSAKMWGWMFHDQYGVVNDLLLKTGIIATPLAWVAEPGLSMWAVVIADVWK 205

Query: 179 TTPFMSLLLLAGLALVPEDLLRAAQVDGASAWRRLTKVILPMIKPAIVVALLFRTLDAFR 238
           TTPFM+L+LLA L L+P DL  AA++DGA+AW+R  ++ LP+I PA++VAL+FR +DA R
Sbjct: 206 TTPFMALMLLAALQLIPGDLYEAARIDGANAWQRFRRITLPLIMPAMIVALIFRVMDALR 265

Query: 239 IFDNIYVLTGGSNNTGSVSILGYDNLFKGFNVGLGSAISVLIFGCVAVIAFIFIKL 294
           +FD IYVLT  S  T SVS    D +     +G GSA SVL+F  VA IA  F+ L
Sbjct: 266 VFDLIYVLTSNSEATVSVSGYARDRMVSYQEMGSGSAASVLVFMMVAGIAACFLTL 321