Pairwise Alignments

Query, 1582 a.a., Probable polyketide beta-ketoacyl synthase Pks4 from Mycobacterium tuberculosis H37Rv

Subject, 2409 a.a., Polyketide synthase modules and related proteins from Variovorax sp. SCN45

 Score =  147 bits (371), Expect = 1e-38
 Identities = 98/293 (33%), Positives = 153/293 (52%), Gaps = 9/293 (3%)

Query: 34   PVWVFSGQGSQWPGMGTELLVAEPVFAATVAAMEPVIARESGFSVTEAMSA--PQTVSGI 91
            PV +F GQG+Q+ GMG  L  A+PVFAA        +   + F + E M +  P+ +S  
Sbjct: 1323 PVLMFPGQGAQYAGMGRLLHAADPVFAAAFDDCIDAVVGTTDFDLRERMFSDDPKALSPT 1382

Query: 92   DRVQPTIFAVQVALAAALKSYGVRPGAIIGHSLGEAAAAVVAGALSLHDGLRVICRRSRL 151
               QP +F ++ ALA  L + GVRP A++GHS+GE  AAV+AG + L D  R++ RR  L
Sbjct: 1383 AVTQPALFTIEYALARRLLATGVRPHALMGHSVGEFVAAVLAGVMRLEDAARLVARRGAL 1442

Query: 152  MSRIAGSGAMASVELPGQQVLSELAIRGISDVVLSVVASPTSTVVGGATQSIRDLVAAWE 211
            M  +  +GAM SV +   +++ +L       + L+    PT+ V  G  ++I  L AA E
Sbjct: 1443 MQALP-AGAMLSVRIGAAELMEKLG----PSLSLAAENGPTACVAAGPFEAIAALQAALE 1497

Query: 212  QQDVLAREVAVDVASHTPQVDPILDELLEVLAEVDPTAPEIPYYSATLWDPRERPSFTG- 270
             + +  R +    A H+  +D  +     ++++V   AP+ P +S       E    T  
Sbjct: 1498 AEGIACRTLQTSHAFHSAMMDGAVAPFEALVSQVALHAPQTPIFSTLTGMLLEAEEATSP 1557

Query: 271  EYWVENLRYTVRFAAAVQAALKDGYR-VFGELAPHPLLTYAVEQNAASLDMPI 322
             YW  +LR  VRF+ AV+AA+    + +F E  P   L+  V Q+ AS  +P+
Sbjct: 1558 AYWARHLRGAVRFSPAVRAAMAHAAQPLFIEAGPRNTLSTLVRQHGASTAVPL 1610