Pairwise Alignments

Query, 1582 a.a., Probable polyketide beta-ketoacyl synthase Pks4 from Mycobacterium tuberculosis H37Rv

Subject, 1833 a.a., type I polyketide synthase from Pectobacterium carotovorum WPP14

 Score =  112 bits (280), Expect = 4e-28
 Identities = 92/360 (25%), Positives = 171/360 (47%), Gaps = 25/360 (6%)

Query: 28  GHDDRGPVWVFSGQGSQWPGMGTELLVAEPVFAATVAA----MEPVIARESGFSVTEAMS 83
           G + +  V++F GQG+Q+  M  EL     VF A++      +EP++       + +   
Sbjct: 524 GKNQKSVVFMFPGQGNQYVNMARELYDTYDVFRASMDQCCNYLEPILDVNLTSIIFQDSD 583

Query: 84  --APQTVSGIDRVQPTIFAVQVALAAALKSYGVRPGAIIGHSLGEAAAAVVAGALSLHDG 141
             A   ++     QP++F V+ +LA    S+G++P  +IGHS+GE  AA ++G  SL D 
Sbjct: 584 NIAESRINETQFTQPSLFVVEYSLAKLWMSWGIQPDVMIGHSVGEYVAACLSGVFSLEDA 643

Query: 142 LRVICRRSRLMSRIAGSGAMASVELPGQQVLSELAIRGISDVVLSVVASPTSTVVGGATQ 201
           L+ +  R +++  +  +G M +V L  + + ++L   G S + ++ V  P   V+ GA+ 
Sbjct: 644 LKAVAMRGKMVQALP-AGDMLAVLLDEESLKAKL--HG-SKLEIAAVNYPGLCVIAGASN 699

Query: 202 SIRDLVAAWEQQDVLAREVAVDVASHTPQVDPILDELLEVLAEVDPTAPEIPYYSATLWD 261
            +       E  ++  + +    A H+  ++P+L    +V+  +   AP+IP+ S    +
Sbjct: 700 DVARFQQQLEDSNIFCKHLDTSHAFHSHMMEPMLPAFKKVIDSITLHAPQIPFVSTVNGE 759

Query: 262 -PRERPSFTGEYWVENLRYTVRFAAAVQAALKDGYR--VFGELAPHPLLTYAVEQNAASL 318
              E  +   +YWV ++R  V F+ A +  + D +   VF E+ P   L  + +Q+ ++ 
Sbjct: 760 WVTEELAKNSDYWVRHVRNPVLFSHAFKTLMADEHHDFVFLEVGPGRSLESSAKQHFSAE 819

Query: 319 D-------MPIATLAAMRRGEQLPFGLRGFVADVHNAGAKVDFSVQYPDGRLVDAPLPSW 371
           D       +P A   A+  GE L   L    A    +G  V +   +P+      PLP +
Sbjct: 820 DGALIYASLPTAKDVAL-SGEHLLSTLGALWA----SGVNVPWHQHHPEQHRRRIPLPGY 874



 Score = 86.3 bits (212), Expect = 3e-20
 Identities = 67/228 (29%), Positives = 98/228 (42%), Gaps = 29/228 (12%)

Query: 1239 RPDGAYLVTGGLGGLGLFLAGELAAAGCGRIVLNSRST------------------PSPH 1280
            + DG YL+TGGLGGLG+ LA  L+      I+L  R+                   P   
Sbjct: 1158 KDDGVYLITGGLGGLGILLANHLSENSNATIILTYRAALPPREEWQAWIQQHPVDDPISE 1217

Query: 1281 ATRVIERLRAAGADIQVECGDIADAATAHRVVAVATASGLP-VRGVLHAAAVVEDATLAN 1339
                + RL A G  I +   D+ D      ++     S  P V GV H A V     +A 
Sbjct: 1218 KLASVLRLEARGNTIHLAQVDVNDYHGMREML-----SAFPQVDGVFHTAGVAGGGIIAL 1272

Query: 1340 VTDELIDRCWAPKVHGAWNIHRATAAQPLEWFCLFSSAAALVGSPGQGAYAAANSWLDAF 1399
              D        PKV G+  +      +  ++F LFSS  ++VG   +  Y + N+++DAF
Sbjct: 1273 KNDADCANVLDPKVAGSLILDELLQDKQPDFFILFSSITSIVGDEARIDYCSGNAFMDAF 1332

Query: 1400 AHWRRAQGLPAT-SIAWGAWAEIGRAT----ALAEGTGAAIAPAEGAR 1442
            AH+R       T S+ WG W ++G A      L E   + +A  E A+
Sbjct: 1333 AHYRNQHRRGRTVSLNWGKWGDVGMAVRWGKQLQEKKNSKLAAVEEAK 1380