Pairwise Alignments

Query, 1582 a.a., Probable polyketide beta-ketoacyl synthase Pks4 from Mycobacterium tuberculosis H37Rv

Subject, 2076 a.a., KR domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  234 bits (598), Expect = 6e-65
 Identities = 261/937 (27%), Positives = 395/937 (42%), Gaps = 68/937 (7%)

Query: 3    ASSFDELSAALRDVAGDQIPYQPAVGHDDRGPVWVFSGQGSQWPGMGTELLVAEPVFAAT 62
            A+S  EL+A L     D  P         R   ++FSGQG+Q  GMG  L   EP F A 
Sbjct: 504  AASPAELAARLEGFKAD--PKAARKASQPRRLAFLFSGQGAQVAGMGRTLYEIEPTFRAE 561

Query: 63   VAAMEPVIARESGFSVTEAMSAP-QTVSGIDRVQPTIFAVQVALAAALKSYGVRPGAIIG 121
            + A+   +       + + + A  + +      QP +FAV+VALA  L ++G+RP A+ G
Sbjct: 562  LDAVAAALDPHLDRKLLDVLFADGEAIHNTGYTQPCLFAVEVALARTLAAWGIRPEAVCG 621

Query: 122  HSLGEAAAAVVAGALSLHDGLRVICRRSRLMSRIAGSGAMASVELPGQQVLSELAIRGIS 181
            HS+GE AA VVAG  SL D  R++  R R+M  +   GAM++V      V   LA     
Sbjct: 622  HSVGEFAACVVAGVYSLDDAARLVATRGRMMQALPAGGAMSAVFAEEAVVAEVLAALDGK 681

Query: 182  DVVLSVVASPTSTVVGGATQSIRDLVAAWEQQDVLAREVAVDVASHTPQVDPILDELLEV 241
             + ++ V  P  TV+ G    +   VAA E + + ++ + V  A H+P +DP L EL   
Sbjct: 682  KIGIAAVNGPQGTVISGEAAEVAKAVAALEAKGIPSKALTVSHAFHSPLMDPALPELDAA 741

Query: 242  L--AEVDPTAPEIPYYSATLWDPRERPSFTGEYWVENLRYTVRFAAAVQAALKDGYRVFG 299
            +   + +  AP + + S T     ++ +   EYW    R  VRFA AV A  K G R F 
Sbjct: 742  VWAVQANAKAPALGWVS-TYTGQSKKDAPDSEYWCSQARQAVRFADAVAALAKSGIRDFV 800

Query: 300  ELAPHPLLTYAVEQNAASLDMPIATLAAMRRGEQLPFGLRGFVADVHNAGAKVDFSV-QY 358
            E+ P   L  A+ ++ A  +  +  L  + +G++    L   V  ++ AG   D++    
Sbjct: 801  EIGPGGAL-LALGRSVAGAE-GLGWLPTLGKGDEHQTLLES-VGALYRAGNDPDWAAFDA 857

Query: 359  P-DGRLVDAPLPSWTHRTLMLSREDSHRSHTGAVQAVHPLLGAHVHLLEEP-ERHVWQAG 416
            P D R +  P+ ++ H  +  +++  +    G   AV    G     L  P   H ++  
Sbjct: 858  PFDLRRLSLPVYAFQHERVWATKD--YEPVGGRRAAVPAGTGLTGRRLPSPLAAHQFETE 915

Query: 417  VGTGAHPWLGDHRIHNVAAFPGAAYCEMALAAARTTLGE-LSEVRDIKFEQTLLL-DEQT 474
                   WL DHR+H     P  A    AL  AR  LGE   EV        L+L D++ 
Sbjct: 916  FSRQRFGWLDDHRVHGAVVLPTTAGLLAALEGARAKLGEGPLEVAGFSHGDALVLADDEA 975

Query: 475  VVSSAATIAAPGILQFAVESHQEGEPARRASAMLHALEEMP-QPPGYDTNALTAAHESSM 533
             +      A      F++ S    E   R           P +   +D  AL       +
Sbjct: 976  RLGHLVVEANGDGAGFSLSSRGGDEDKWRTHMRGEIRRAKPGKASTFDAKALKRRCHLPV 1035

Query: 534  SGEELRKMFNSLGIQYGPAFSGLVAVHTARGDVTTVLAEVALPGAIRSQQSAYASHPALL 593
              +       SLG+ YGP+F  + ++    G+    LA + LP  +    +    HPALL
Sbjct: 1036 KADSYYAGMRSLGLAYGPSFRAIESLWRGEGE---ALARLRLPDLVEPLGNG-LMHPALL 1091

Query: 594  DACFQSVLVHPEV--------QKATVG-GLMLPVGVRRLRNYHSTRSAHYCLARVTSSSR 644
            DAC     V+P V        Q    G    LP+ + R     S     +  AR    + 
Sbjct: 1092 DACLH---VYPAVIEEHGDFTQPPPEGSSAHLPLAMERFSGARSEERELWVHARRRKPNG 1148

Query: 645  AGE--CEADLDVFDQAGTVLLTVEGL---RLAAGISEHERANRVFDERLLTIEWERGELP 699
             G      D++ FD  G  + + +GL   +L A + +  RA+   D  L    W+   +P
Sbjct: 1149 HGADITVIDIEAFDSDGRPVASFDGLSVKKLPASLFKPRRADGE-DGWLYVPRWDDRPVP 1207

Query: 700  EVPQIDAG--SWLLLSASEADPLTAQLADALNAVGAQSTSVAS---ASDVAQLRSLLGGR 754
             V    +G  +WLLL     D     L +AL   GA    VA+    +D+     LL G 
Sbjct: 1208 PVAAKASGPLTWLLLG---GDGFAKPLKEALGRTGAACRLVAAKDCPTDLEGFSRLLEGF 1264

Query: 755  LT------------GVVVVTGPPTGGLTQCGRDYVSQLVGIAREL-AELPG--EPPRLFV 799
                          G V   G    G     R     ++G++R L     G    P+L +
Sbjct: 1265 AAEAGAGKAGILHLGAVDAPGEEAWGDEGAQRRLYDSVLGLSRALGVNRTGFLVAPKLHL 1324

Query: 800  VTRSAASVLPSD-LANLEQAGLRGLMRVIDSEHPHLGATAIDVD---NDETVAALVASQL 855
            VTR+AA    ++  A++  AG+ G+ R +  E P L    ID++        A L+A+ L
Sbjct: 1325 VTRNAADATGTEPPAHVLGAGMWGMGRSLALEAPALWGGLIDLEAGGASGAEAQLLAAHL 1384

Query: 856  QSGSQEDETAWRNGIWYTARLRPGPLRPAERRTAVVE 892
             +   E + A R G    ARL   P+   ERR A  E
Sbjct: 1385 AAADDEAQVALRGGKRLAARLVRAPV--PERRPAAGE 1419



 Score =  156 bits (394), Expect = 3e-41
 Identities = 121/373 (32%), Positives = 181/373 (48%), Gaps = 28/373 (7%)

Query: 1232 PEQVRTSRPDGAYLVTGGLGGLGLFLAGELAAAG-CGRIVLNSRS-TPSPHATRVIERLR 1289
            PE+   +   G YLVTGGLG LG+  A  LAA+     +VL SR    + +A  V+ RL 
Sbjct: 1411 PERRPAAGEGGTYLVTGGLGALGVLTAEWLAASRKAAHLVLVSRQGDKAANAAEVLARLE 1470

Query: 1290 AAGADIQVECGDIADAATAHRVVAVATASGLPVRGVLHAAAVVEDATLANVTDELIDRCW 1349
            A GA + +   DIA      R++     +   ++G+ H+A V++D  +  +      R  
Sbjct: 1471 ALGAKVTIAKADIAKEGDVARLLGRLAKAEPALKGIYHSAGVLDDGLVDQMDWTKFRRAL 1530

Query: 1350 APKVHGAWNIHRATAAQPLEWFCLFSSAAALVGSPGQGAYAAANSWLDAFAHWRRAQGLP 1409
            APK+   W +H+ +    L  F L+SS  +++GS GQ  Y   N+ LDA A  RRA GLP
Sbjct: 1531 APKLDAGWWLHKHSQGLKLHDFVLYSSVLSVIGSAGQTNYTTGNACLDALAAHRRALGLP 1590

Query: 1410 ATSIAWGAWAEIGRATALAEGTGAA--------IAPAEGARAFQTLLRYGRAYSGYAPIM 1461
            A S+ WGAWA  G A  L     A         I P  G  AF  L       +G A ++
Sbjct: 1591 ALSVNWGAWASAGMADGLGSQGEAIWRARGIHYIEPDLGREAFDLLF---DGAAGQAVVL 1647

Query: 1462 GTPWLTAFAQRSRFAEAFHATGQNQPATGKFLAELGSLPR---EEWPRTVRRLVSDQISL 1518
               W T F ++ +    F+A  Q   A G   A++ +L +      P   R  ++D ++ 
Sbjct: 1648 PADWPT-FLRQFQVPPRFYAELQG-GAVGGLAADIEALKQAMAAPEPGIRRAAITDFLAR 1705

Query: 1519 LLRRT------IDPDRPLSDYGLDSLGNLELRTRIETETGIRVSPTKITTVRGLAEHVCD 1572
             +  T      ++ DRPL + GLDSL ++ L  R+E+ TG+R+   K+     + E V D
Sbjct: 1706 QVMTTLGMTAKVESDRPLRELGLDSLMSVTLINRVESATGLRIPAVKLIKGPSIDELVAD 1765

Query: 1573 ---ELAAAQ-SAP 1581
               +LA  + SAP
Sbjct: 1766 VWPDLAGVEVSAP 1778