Pairwise Alignments

Query, 457 a.a., PE-PGRS family protein PE_PGRS18 from Mycobacterium tuberculosis H37Rv

Subject, 957 a.a., PE-PGRS family protein PE_PGRS3 from Mycobacterium tuberculosis H37Rv

 Score =  290 bits (743), Expect = 1e-82
 Identities = 173/315 (54%), Positives = 199/315 (63%), Gaps = 36/315 (11%)

Query: 1   MSFVNVAPQLVSTAAADAARIGSAINTANTAAAA-TTQVLAAAHDEVSTAIAALFGSHGQ 59
           MSFV  AP++++ AA D A +GS+I+ AN AAAA TT ++AA  DEVSTAIAALFG+HGQ
Sbjct: 1   MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60

Query: 60  HYQAISAQVAAYQERFVLALSQASSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGD 119
            YQA+SAQ  A+  +FV AL+     YA AEAA+ +PL   LD IN    + TGRPLIG+
Sbjct: 61  AYQALSAQAQAFHAQFVQALTSGGGAYAAAEAAAVSPL---LDPINEFFLANTGRPLIGN 117

Query: 120 GANGIDGTGQAGGNGGWLWGNGG---------NGGSGAPGQAGGAGGAAGLIGNGGAGGA 170
           GANG  GTG  GG+GGWL GNGG         NGG+G  G AGG GGA GLIGNGGAGGA
Sbjct: 118 GANGAPGTGANGGDGGWLIGNGGAGGSGAAGVNGGAGGNGGAGGNGGAGGLIGNGGAGGA 177

Query: 171 GGQGLPFEAGANGGAGGAGG--WLFGNGGAGGVGGAGGAGTTFGVAGGDGGTGGVGGHGG 228
           GG      +   GG+GGAGG   LFG GGAGG GG         + GG GG GG GG+ G
Sbjct: 178 GG----VASSGIGGSGGAGGNAMLFGAGGAGGAGGG-----VVALTGGAGGAGGAGGNAG 228

Query: 229 LI----GVGGHGGD------GGTGGTGGAVSLARAGTAGGAGGGPAGGIGGAGGVGGAGG 278
           L+    GVGG GG       GG GG GGA  L   G  GG+GG  AG  GGAGG GGAGG
Sbjct: 229 LLFGAAGVGGAGGFTNGSALGGAGGAGGAGGLFATGGVGGSGG--AGSSGGAGGAGGAGG 286

Query: 279 AAGAVTTITHASFND 293
             GA  T  H  F D
Sbjct: 287 LFGAGGTGGHGGFAD 301



 Score =  194 bits (494), Expect = 8e-54
 Identities = 138/311 (44%), Positives = 157/311 (50%), Gaps = 29/311 (9%)

Query: 92  ASATPL----QNVLDAINAPVQSLTGRPLIGDGANGIDGTGQAGGNGGWLWGNGGNGGSG 147
           AS +PL    QNVL+ +N P Q+LTGRPLIG+GANG  GTG  GG GGWL+GNG NG  G
Sbjct: 503 ASTSPLHTLQQNVLNVVNEPFQTLTGRPLIGNGANGTPGTGADGGAGGWLFGNGANGTPG 562

Query: 148 APGQAGGAGGAAGLIGNGGAGGAGGQGLPFEAGANGGAGGAGGWLFGNGGAGGVGG-AGG 206
             G AGGAGG   L GNGG GG G       A A GGAGGAGG LFG GG GG GG A G
Sbjct: 563 T-GAAGGAGG--WLFGNGGNGGHGATNT--AATATGGAGGAGGILFGTGGNGGTGGIATG 617

Query: 207 AGTTFGVAGGDG-----GTGGVGGHGG-LIGVGGHGGDGGTGGTGGAVSLARAGTAG-GA 259
           AG   G  G  G     G+GG GG+GG  IGV G GG GG GG  G +    AGT G GA
Sbjct: 618 AGGIGGAGGAGGVSLLIGSGGTGGNGGNSIGVAGIGGAGGRGGDAGLL-FGAAGTGGHGA 676

Query: 260 GGGPAGGIGGAGGVGG--AGGAAGAVTTITHASFNDPHGVAVNPGGNIYV-TNQGSNTVS 316
            GG   G+GGAGG GG  A G AG       A  N  +G     GG     TN G+    
Sbjct: 677 AGGVPAGVGGAGGNGGLFANGGAGGAGGFNAAGGNGGNGGLFGTGGTGGAGTNFGAG--- 733

Query: 317 VIDPVTNTVTGSITDGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPNTNTVTGSIPVGTG 376
                 N   G +    G  G A S  +G+            ++    +   G     + 
Sbjct: 734 -----GNGGNGGLFGAGGTGGAAGSGGSGITTGGGGHGGNAGLLSLGASGGAGGSGGASS 788

Query: 377 AYGVAVNPGGN 387
             G A   GGN
Sbjct: 789 LAGGAGGTGGN 799



 Score = 28.9 bits (63), Expect = 8e-04
 Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 10/108 (9%)

Query: 245 GGAVSLARAGTAGGAGGGPAGGIG----GAGGVGGAGGAAGAVTTITHASFNDPHGVAVN 300
           G ++S A A  A       A G          + GA G A    +    +F+     A+ 
Sbjct: 22  GSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQAYQALSAQAQAFHAQFVQALT 81

Query: 301 PGGNIYVTNQGSNTVSVIDPVTN---TVTGSITDGNGPSGVAVSPVTG 345
            GG  Y   + +    ++DP+       TG    GNG +G   +P TG
Sbjct: 82  SGGGAYAAAEAAAVSPLLDPINEFFLANTGRPLIGNGANG---APGTG 126