Pairwise Alignments

Query, 958 a.a., Probable conserved transmembrane transport protein MmpL1 from Mycobacterium tuberculosis H37Rv

Subject, 791 a.a., RND transporter from Pseudomonas simiae WCS417

 Score = 45.1 bits (105), Expect = 2e-08
 Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 5/152 (3%)

Query: 195 TITGISIAVIAIMLFIAYRSLSAALIMLLTVGLELLAVRGIISTFAVNDLMGLSTFTVNV 254
           TI  +    +A M  I +RS +A L ++L + L  +    +++   +    G+   T+ V
Sbjct: 624 TILILVYLCVATMCMITFRSWAATLCIVLPLVLTSVLGNALMAFMGI----GVKVATLPV 679

Query: 255 LVALTIAASTDYIIFLVGRYQEARATGQNREAAYYTMFGGTAHVVLASGLTVAGAMYCLG 314
            VAL +    DY I++  R +     G   + AYY     T   VL +GL +A  +    
Sbjct: 680 -VALGVGIGVDYGIYIYSRLESFLRAGLPLQEAYYQTLKSTGKAVLFTGLCLAIGVCTWI 738

Query: 315 FTRLPYFNTLASPCAIGLVTVMLASLTLAPAI 346
           F+ + +   +       L+  M  +L L PA+
Sbjct: 739 FSAIKFQADMGLMLTFMLLWNMFGALWLLPAL 770



 Score = 44.3 bits (103), Expect = 3e-08
 Identities = 39/177 (22%), Positives = 80/177 (45%), Gaps = 16/177 (9%)

Query: 747 AGTSSTYKDIHEGTLYDVMIAVVASLCLIFIIMLGITRSVVASAVIVGTVALSLGSAFGL 806
           A T+   K+  E T+  ++   VA++C+I       T  +V   V+   +  +L +  G+
Sbjct: 612 AATNEVIKE-SELTILILVYLCVATMCMITFRSWAATLCIVLPLVLTSVLGNALMAFMGI 670

Query: 807 SVLIWQHILHMPLHWLVLPMAIIVMLAVGSDYNLLLIARFQEEIGAG--LKTGMIRAMAG 864
            V +             LP+ + + + +G DY + + +R +  + AG  L+    + +  
Sbjct: 671 GVKV-----------ATLPV-VALGVGIGVDYGIYIYSRLESFLRAGLPLQEAYYQTLKS 718

Query: 865 TGRVVTIAGLVFAFTMGSMVASDLRVVGQIGTTIMIGLLFDTLVVRSYMTPALATLL 921
           TG+ V   GL  A  + + + S ++    +G  +   LL++ +    ++ PALA  L
Sbjct: 719 TGKAVLFTGLCLAIGVCTWIFSAIKFQADMGLMLTFMLLWN-MFGALWLLPALARFL 774