Pairwise Alignments
Query, 963 a.a., PPE family protein PPE6 from Mycobacterium tuberculosis H37Rv
Subject, 590 a.a., PPE family protein PPE53 from Mycobacterium tuberculosis H37Rv
Score = 406 bits (1043), Expect = e-117
Identities = 234/486 (48%), Positives = 278/486 (57%), Gaps = 89/486 (18%)
Query: 1 MDFVVSAPEVNSLRMYLGAGSGPMLAAAAAWDGLADELAVAASWFGSVTSGLADAAWRGP 60
M++ V PE+NSLRM+ GAGS PMLAA+ AWD LA ELAVAAS FGSVTSGLA +W+G
Sbjct: 1 MNYSVLPPEINSLRMFTGAGSAPMLAASVAWDRLAAELAVAASSFGSVTSGLAGQSWQGA 60
Query: 61 AAVAMARAVAPYLGWLISATAQAEQAAAQARVAVATFEAARAATVHPAIVAANRAVLVSL 120
AA AMA A APY GWL +A A+A A+AQA+ + FEAARAATVHP +VAANR V L
Sbjct: 61 AAAAMAAAAAPYAGWLAAAAARAAGASAQAKAVASAFEAARAATVHPMLVAANRNAFVQL 120
Query: 121 VSSNLLGFNAPAIAATEAAYERMWAQDVAAMVGYHAGASAAVSALMPFTQQLKKLAGLSE 180
V SNL G NAPAIAA EA YE+MWA DVAAMVGYH GASAA + L ++ GL +
Sbjct: 121 VLSNLFGQNAPAIAAAEAMYEQMWAADVAAMVGYHGGASAAAAQLSSWS------IGLQQ 174
Query: 181 RLTSAAAAAA-------------GPPSAAGFNLGLANVGANNVGNGNVGVFNVGFGN--- 224
L +A +A A G + +NLG N G NVG+GN G NVG GN
Sbjct: 175 ALPAAPSALAAAIGLGNIGVGNLGGGNTGDYNLGSGNSGNANVGSGNSGNANVGSGNDGA 234
Query: 225 ------------LGSYNLGFANLGSD---------------------------------- 238
LGS N+G NLGS
Sbjct: 235 TNLGSGNIGNTNLGSGNVGNVNLGSGNRGFGNLGNGNFGSGNLGSGNTGSTNFGGGNLGS 294
Query: 239 -NLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSHNIGLFNS 297
NLG N+G NIGF N G NN+G GN G+NN+G GLTG+ +G G+ NSG N+G NS
Sbjct: 295 FNLGSGNIGSSNIGFGNNGDNNLGLGNNGNNNIGFGLTGDNLVGIGALNSGIGNLGFGNS 354
Query: 298 GSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTG----GF-------- 345
G+ N+G FNSG N G NSG NFG GN G NTG+ N GD NTG GF
Sbjct: 355 GNNNIGFFNSGNNNVGFFNSGNNNFGFGNAGDINTGFGNAGDTNTGFGNAGFFNMGIGNA 414
Query: 346 --------NPGSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
N GS+N G N GN + G NAG N G+ N G NTG AN+G++NTG F +
Sbjct: 415 GNEDMGVGNGGSFNVGVGNAGNQSVGFGNAGTLNVGFANAGSINTGFANSGSINTGGFDS 474
Query: 398 GNYSNG 403
G+ + G
Sbjct: 475 GDRNTG 480
Score = 245 bits (626), Expect = 5e-69
Identities = 140/318 (44%), Positives = 178/318 (55%), Gaps = 32/318 (10%)
Query: 510 IPAAPGFGN----STTSPSSGFFNAGAGTASGFGNFGGGASGFWNLASATSGLS--GFGN 563
+ AA G GN + ++G +N G+G SG N G G SG N+ S G + G GN
Sbjct: 183 LAAAIGLGNIGVGNLGGGNTGDYNLGSGN-SGNANVGSGNSGNANVGSGNDGATNLGSGN 241
Query: 564 VGALGSGVANVGNTISGLYNTSTSNLATPAFNSGLLHHSVGTMTLNFGLANVGGNNVGGA 623
+G G NVGN G N NL F SG N G N G N GG
Sbjct: 242 IGNTNLGSGNVGNVNLGSGNRGFGNLGNGNFGSG-----------NLGSGNTGSTNFGGG 290
Query: 624 NAGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSN------------NLG 671
N G FN+G N+G NIGFGN G +NLG + G+ NIGF TG N NLG
Sbjct: 291 NLGSFNLGSGNIGSSNIGFGNNGDNNLGLGNNGNNNIGFGLTGDNLVGIGALNSGIGNLG 350
Query: 672 FANTGDNNIGFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGN 731
F N+G+NNIGF N G+NN+G +G+ GFG N+G N G N+GD N G N+G N
Sbjct: 351 FGNSGNNNIGFFNSGNNNVGFFNSGNNNFGFG--NAGDINTGFGNAGDTNTGFGNAGFFN 408
Query: 732 FGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVN 791
GIGNAG + G+GN G+ N G+GNAG+ + G N+G LN G N GS NTG N+GS+N
Sbjct: 409 MGIGNAGNEDMGVGNGGSFNVGVGNAGNQSVGFGNAGTLNVGFANAGSINTGFANSGSIN 468
Query: 792 TGGFNAGNYNTGYFNTGD 809
TGGF++G+ NTG+ ++ D
Sbjct: 469 TGGFDSGDRNTGFGSSVD 486
Score = 201 bits (512), Expect = 9e-56
Identities = 135/361 (37%), Positives = 177/361 (49%), Gaps = 48/361 (13%)
Query: 487 GPTTTIDGNL------TGMVGGVSIPLIKIPAAPGFGNSTTSPSSGFFNAGAGTASGFGN 540
G T GN+ +G VG V++ GFGN + G N G+G +G N
Sbjct: 233 GATNLGSGNIGNTNLGSGNVGNVNLG----SGNRGFGNLGNG-NFGSGNLGSGN-TGSTN 286
Query: 541 FGGGASGFWNLASATSGLS--GFGNVGALGSGVANVGNTISGLYNTSTSNLATPAFNSGL 598
FGGG G +NL S G S GFGN G G+ N GN G T + + A NSG+
Sbjct: 287 FGGGNLGSFNLGSGNIGSSNIGFGNNGDNNLGLGNNGNNNIGFGLTGDNLVGIGALNSGI 346
Query: 599 LHHSVGTM-TLNFGLANVGGNNVGGANAGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGS 657
+ G N G N G NNVG N+G N G N GD N GFGN G N GF +AG
Sbjct: 347 GNLGFGNSGNNNIGFFNSGNNNVGFFNSGNNNFGFGNAGDINTGFGNAGDTNTGFGNAGF 406
Query: 658 YNIGFANTGSNNLGFANTGDNNIGFANIGSNNIGIGLTGSGQIGF--------GSLNSGS 709
+N+G N G+ ++G N G N+G N G+ ++G G G+ +GF G NSGS
Sbjct: 407 FNMGIGNAGNEDMGVGNGGSFNVGVGNAGNQSVGFGNAGTLNVGFANAGSINTGFANSGS 466
Query: 710 HNIGLFNSGDGNIGL-----------------------FNSGSGNFGIGNAGTGNWGIGN 746
N G F+SGD N G FN+G+ + G GN G GI N
Sbjct: 467 INTGGFDSGDRNTGFGSSVDQSVSSSGFGNTGMNSSGFFNTGNVSAGYGNNGDVQSGINN 526
Query: 747 SGAGNFGIG--NAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGY 804
+ +G F +G N+G+ G+ NSG TG N G+ NTG NTG ++GGFN G+ +G+
Sbjct: 527 TNSGGFNVGFYNSGAGTVGIANSGLQTTGIANSGTLNTGVANTGDHSSGGFNQGSDQSGF 586
Query: 805 F 805
F
Sbjct: 587 F 587
Score = 188 bits (478), Expect = 8e-52
Identities = 102/236 (43%), Positives = 141/236 (59%), Gaps = 17/236 (7%)
Query: 191 GPPSAAGFNLGLANVGANNVGNGNVGVFNVGFGNLGSYNLGFA------------NLGSD 238
G + FNLG N+G++N+G GN G N+G GN G+ N+GF N G
Sbjct: 288 GGGNLGSFNLGSGNIGSSNIGFGNNGDNNLGLGNNGNNNIGFGLTGDNLVGIGALNSGIG 347
Query: 239 NLGLANLGGHNIGFANTGSNNVGFGNTGSNNVGIGLTGNGQIGFGSFNSGSHNIGLFNSG 298
NLG N G +NIGF N+G+NNVGF N+G+NN G G G+ GFG N+G N G N+G
Sbjct: 348 NLGFGNSGNNNIGFFNSGNNNVGFFNSGNNNFGFGNAGDINTGFG--NAGDTNTGFGNAG 405
Query: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
N+G+ N+G + G+GN G+ N G+GN G+ + G+ N G +N G N GS NTG N+G
Sbjct: 406 FFNMGIGNAGNEDMGVGNGGSFNVGVGNAGNQSVGFGNAGTLNVGFANAGSINTGFANSG 465
Query: 359 NYNTGSFNAGNYNTGYFNTGDY---NTGVANTGNVNTGAFIAGNYSNGVLWRGDYQ 411
+ NTG F++G+ NTG+ ++ D ++G NTG ++G F GN S G GD Q
Sbjct: 466 SINTGGFDSGDRNTGFGSSVDQSVSSSGFGNTGMNSSGFFNTGNVSAGYGNNGDVQ 521
Score = 171 bits (434), Expect = 1e-46
Identities = 92/207 (44%), Positives = 118/207 (57%), Gaps = 4/207 (1%)
Query: 611 GLANVGGNNVGGANAGIFNVGLANLGDYNIGFGNLGGDNLGFAHAGSYNIGFANTGSNNL 670
GL N+G N+GG N G +N+G N G+ N+G GN G N+G + G+ N+G N G+ NL
Sbjct: 188 GLGNIGVGNLGGGNTGDYNLGSGNSGNANVGSGNSGNANVGSGNDGATNLGSGNIGNTNL 247
Query: 671 GFANTGDNNIGFANIGSNNIGIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSG 730
G N G+ N+G N G N+G G GSG +G G N+GS N G N G N+G N GS
Sbjct: 248 GSGNVGNVNLGSGNRGFGNLGNGNFGSGNLGSG--NTGSTNFGGGNLGSFNLGSGNIGSS 305
Query: 731 NFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGL--FNSGDLNTGSLNPGSYNTGSVNTG 788
N G GN G N G+GN+G N G G G G+ NSG N G N G+ N G N+G
Sbjct: 306 NIGFGNNGDNNLGLGNNGNNNIGFGLTGDNLVGIGALNSGIGNLGFGNSGNNNIGFFNSG 365
Query: 789 SVNTGGFNAGNYNTGYFNTGDLQHRHG 815
+ N G FN+GN N G+ N GD+ G
Sbjct: 366 NNNVGFFNSGNNNFGFGNAGDINTGFG 392
Score = 148 bits (374), Expect = 9e-40
Identities = 83/195 (42%), Positives = 105/195 (53%), Gaps = 23/195 (11%)
Query: 184 SAAAAAAGPPSAAGFNLGLANVGANNVGNGNVGVFNVGFGNLGSYNLGFANLGSDNLGLA 243
+A G +A FN+G+ N G ++G GN G FNVG GN G+ ++GF N G+ N+G A
Sbjct: 393 NAGDTNTGFGNAGFFNMGIGNAGNEDMGVGNGGSFNVGVGNAGNQSVGFGNAGTLNVGFA 452
Query: 244 NLGGHNIGFANTGSNNVG-----------------------FGNTGSNNVGIGLTGNGQI 280
N G N GFAN+GS N G FGNTG N+ G TGN
Sbjct: 453 NAGSINTGFANSGSINTGGFDSGDRNTGFGSSVDQSVSSSGFGNTGMNSSGFFNTGNVSA 512
Query: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
G+G+ I NSG NVG +NSG G GI NSG G+ N+G+ NTG NTGD
Sbjct: 513 GYGNNGDVQSGINNTNSGGFNVGFYNSGAGTVGIANSGLQTTGIANSGTLNTGVANTGDH 572
Query: 341 NTGGFNPGSYNTGNF 355
++GGFN GS +G F
Sbjct: 573 SSGGFNQGSDQSGFF 587
Score = 74.7 bits (182), Expect = 2e-17
Identities = 42/88 (47%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 323 GLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNT 382
GLGN G N G NTGD N G N G+ N G+ N+GN N GS N G N G N G+ N
Sbjct: 188 GLGNIGVGNLGGGNTGDYNLGSGNSGNANVGSGNSGNANVGSGNDGATNLGSGNIGNTNL 247
Query: 383 GVANTGNVNTGAFIAGNYSNGVLWRGDY 410
G N GNVN G+ GN G L G++
Sbjct: 248 GSGNVGNVNLGS---GNRGFGNLGNGNF 272
Score = 51.6 bits (122), Expect = 1e-10
Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 17/104 (16%)
Query: 176 AGLSERLTSAAAAAAGPPSAAGFNLGLANVGANNVG-------NGNVGVFNVGFGNLGSY 228
+ + + ++S+ G S+ FN G + G N G N N G FNVGF N G+
Sbjct: 483 SSVDQSVSSSGFGNTGMNSSGFFNTGNVSAGYGNNGDVQSGINNTNSGGFNVGFYNSGAG 542
Query: 229 NLGFANLGSD----------NLGLANLGGHNIGFANTGSNNVGF 262
+G AN G N G+AN G H+ G N GS+ GF
Sbjct: 543 TVGIANSGLQTTGIANSGTLNTGVANTGDHSSGGFNQGSDQSGF 586