Pairwise Alignments

Query, 957 a.a., PE-PGRS family protein PE_PGRS3 from Mycobacterium tuberculosis H37Rv

Subject, 370 a.a., PE-PGRS family protein PE_PGRS29 from Mycobacterium tuberculosis H37Rv

 Score =  357 bits (916), Expect = e-103
 Identities = 224/403 (55%), Positives = 249/403 (61%), Gaps = 48/403 (11%)

Query: 1   MSFVIAAPEVIAAAATDLASLGSSISAANAAAAANTTALMAAGADEVSTAIAALFGAHGQ 60
           MSFV+A  E ++ AA +LA LGS ISAAN+AAAA TTA+ AAGADEVS A+AALFGAHGQ
Sbjct: 1   MSFVVANTEFVSGAAGNLARLGSMISAANSAAAAQTTAVAAAGADEVSAAVAALFGAHGQ 60

Query: 61  AYQALSAQAQAFHAQFVQALTSGGGAYAAAEA---AAVSPLLDPINEFFLANTGRPLIGN 117
            YQ LSAQA AFH+QFVQAL+ G  AYAAAEA     + PL D IN   LA   RPLIGN
Sbjct: 61  TYQVLSAQAAAFHSQFVQALSGGAQAYAAAEATNFGPLQPLFDVINAPTLALLNRPLIGN 120

Query: 118 GANGAPGTGANGGDGGWLIGNGGAGGSGAAGV--NGGAGGNGGAGGNGGAGGLIGNGGAG 175
           GA+G      NG  GG LIGNGG G S AAG   NGGA G  G GGNGG G L  NGGAG
Sbjct: 121 GADGT-AANPNGQAGGLLIGNGGNGFSPAAGPGGNGGAAGLLGHGGNGGVGALGANGGAG 179

Query: 176 GAGGVA---------SSGIGGSGGAGGNAMLFGAGGAGGAGGGVVALTGGAGGAGGAGGN 226
           G GG           S G GG+GG GG+A+LFGAGGAGG       ++    GAGG+GGN
Sbjct: 180 GTGGWLFGNGGAGGNSGGGGGAGGIGGSAVLFGAGGAGG-------ISPNGMGAGGSGGN 232

Query: 227 AGLLFGAAGVGGAGGFTNGSALGGAGGAGGAGGLFATGGVGGSGGAGSSGGAGGAGGAGG 286
            GL FG  G G +      S LGG GGAGG   LF  GG GG+  A S+G AG  G AG 
Sbjct: 233 GGLFFGNGGAGAS------SFLGG-GGAGGRAFLFGDGGAGGA--ALSAGSAGRGGDAGF 283

Query: 287 LFGAGGTGGHGGFADSSFGGVGGAGGAGGLFGAGGEGGSGGHSLVAGGDGGAGGNAGMLA 346
            +G GG GG G    SS    GGAGG  GLFG GGEGG GG     GG+GG GGNA ++ 
Sbjct: 284 FYGNGGAGGSGAGGASS--AHGGAGGQAGLFGNGGEGGDGG---ALGGNGGNGGNAQLI- 337

Query: 347 LGAAGGAGGIGGDGGTLTAGGIGGAGGAGGNAGLLFGSGGSGG 389
                G GG GGDGG        GA G GG  GLL G  G+ G
Sbjct: 338 -----GNGGDGGDGGG------AGAPGLGGRGGLLLGLPGANG 369



 Score =  224 bits (572), Expect = 6e-63
 Identities = 167/381 (43%), Positives = 192/381 (50%), Gaps = 51/381 (13%)

Query: 430 IGGAGGTPGLIGNGGNGGNGGASAVTGGNGGIGGTGVLIGNGGNGGSGG-----IGAGKA 484
           + GA G    +G+  +  N  A+A T      G   V        G+ G     + A  A
Sbjct: 11  VSGAAGNLARLGSMISAANSAAAAQTTAVAAAGADEVSAAVAALFGAHGQTYQVLSAQAA 70

Query: 485 GVGG--VSGLLLGLDGFNAPASTS--PLHTLQQNVLNVVNEPFQTLTGRPLIGNGANGTP 540
                 V  L  G   + A  +T+  PL    Q + +V+N P   L  RPLIGNGA+GT 
Sbjct: 71  AFHSQFVQALSGGAQAYAAAEATNFGPL----QPLFDVINAPTLALLNRPLIGNGADGT- 125

Query: 541 GTGADGGAGGWLFGNGANG---TPGTGAAGGAGGWLFGNGGNGGHGATNTAATATGGAGG 597
               +G AGG L GNG NG     G G  GGA G L G+GGNGG GA      A GGAGG
Sbjct: 126 AANPNGQAGGLLIGNGGNGFSPAAGPGGNGGAAG-LLGHGGNGGVGALG----ANGGAGG 180

Query: 598 AGGILFGTGGNGGTGGIATGAGGIG------GAGGAGGVSLL-IGSGGTGGNGGNSIGVA 650
            GG LFG GG GG  G   GAGGIG      GAGGAGG+S   +G+GG+GGNGG   G  
Sbjct: 181 TGGWLFGNGGAGGNSGGGGGAGGIGGSAVLFGAGGAGGISPNGMGAGGSGGNGGLFFGNG 240

Query: 651 GIG-----GAGGRGGDAGLLFGAAGTGGHGAAGGVPAGVGGAGGNGGLF-ANGGAGGAGG 704
           G G     G GG GG A  LFG  G GG      + AG  G GG+ G F  NGGAGG+G 
Sbjct: 241 GAGASSFLGGGGAGGRA-FLFGDGGAGG----AALSAGSAGRGGDAGFFYGNGGAGGSGA 295

Query: 705 FNAA---GGNGGNGGLFGTGGTGGAGTNFGA-GGNGGNGGLFGAGGTGGAAGSGGSGITT 760
             A+   GG GG  GLFG GG GG G   G  GGNGGN  L G GG GG  G  G+    
Sbjct: 296 GGASSAHGGAGGQAGLFGNGGEGGDGGALGGNGGNGGNAQLIGNGGDGGDGGGAGA---P 352

Query: 761 GGGGHGGNAGLLSLGASGGAG 781
           G GG GG    L LG  G  G
Sbjct: 353 GLGGRGG----LLLGLPGANG 369