Pairwise Alignments

Query, 357 a.a., Probable acyl-CoA dehydrogenase FadE3 from Mycobacterium tuberculosis H37Rv

Subject, 375 a.a., 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) from Pseudomonas simiae WCS417

 Score =  233 bits (595), Expect = 5e-66
 Identities = 131/353 (37%), Positives = 209/353 (59%), Gaps = 9/353 (2%)

Query: 6   NDDEAMLVATVRAFIDRDVKPTVREVEHANSYPEAWIEQMKHIGIYGLAIDEQYGGSPVS 65
           N+++  +    R F    +KP   E +  + +P+  I +M  +G +G+ + EQ+GG    
Sbjct: 4   NEEQLQISDAARQFAQERLKPFAAEWDREHRFPKEAIGEMAELGFFGMLVPEQWGGCDTG 63

Query: 66  MPCYVQVTQELARGWMSLAGAMGGHTVVAKLLTL-FGTEEQRRTYLPPMASGELRATMAL 124
              Y    +E+A G  + +  M  H  V  +  L FG ++Q+  +L P+ASG +    AL
Sbjct: 64  YLAYAMALEEIAAGDGACSTIMSVHNSVGCVPVLKFGNDQQKEQFLKPLASGAMLGAFAL 123

Query: 125 TEPGGGSDLQNMSTTALADGPEGSAGLLINGCKTWISNARRSGLFAVLCKTDPNATPRHQ 184
           TEP  GSD  ++ T A  +G       ++NGCK +I++ + +G+  V   TDP A  R  
Sbjct: 124 TEPQAGSDASSLKTRARLEGDH----YVLNGCKQFITSGQNAGVVIVFAVTDPAAGKR-- 177

Query: 185 GMSIVLVEP-GPGLTVSRDLPKLGYKGVESCELSFDNLRVPVSAILGGAMGQGFSQMMKG 243
           G+S  +V    PG +V+R   KLG    ++C++ F++++VPV+  LG   G+G+   +  
Sbjct: 178 GISAFIVPTDSPGYSVARVEDKLGQHASDTCQILFEDVKVPVANRLGEE-GEGYKIALAN 236

Query: 244 LETGRIQVAARALGVATAALEDSLAYAQQRESFGRPIWQHQAVGNYLADMATKLTAARQL 303
           LE GR+ +A++A+G+A AA E +  YA++RESFG+PI +HQAV   LADMAT++  ARQ+
Sbjct: 237 LEGGRVGIASQAVGMARAAFEAARDYARERESFGKPIIEHQAVAFRLADMATQIAVARQM 296

Query: 304 TRYAAERYDSGQRCDMEAGMAKLFASEVAMEIALNAVRIHGGYGYSTEYDVER 356
             YAA   DSG+   +EA MAKLFASE+A ++   A++  GGYGY +++ +ER
Sbjct: 297 VHYAAALRDSGKPALVEASMAKLFASEMAEKVCSAALQTLGGYGYLSDFPLER 349