Pairwise Alignments

Query, 357 a.a., Probable acyl-CoA dehydrogenase FadE3 from Mycobacterium tuberculosis H37Rv

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  240 bits (613), Expect = 4e-68
 Identities = 134/354 (37%), Positives = 215/354 (60%), Gaps = 9/354 (2%)

Query: 5   LNDDEAMLVATVRAFIDRDVKPTVREVEHANSYPEAWIEQMKHIGIYGLAIDEQYGGSPV 64
           +ND++  +   VRAF    +KP   + +  + +P+  I++M  +G++G+ + EQ+GGS  
Sbjct: 3   VNDEQQQIADAVRAFAQERLKPFAEQWDKDHRFPKEAIDEMAELGLFGMLVPEQWGGSDT 62

Query: 65  SMPCYVQVTQELARGWMSLAGAMGGHTVVAKLLTL-FGTEEQRRTYLPPMASGELRATMA 123
               Y    +E+A G  + +  M  H  V  +  L FG E+Q+  +L P+A+G +    A
Sbjct: 63  GYVAYAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGNEQQKEQFLTPLATGAMLGAFA 122

Query: 124 LTEPGGGSDLQNMSTTALADGPEGSAGLLINGCKTWISNARRSGLFAVLCKTDPNATPRH 183
           LTEP  GSD  ++ T A  +G       ++NG K +I++ + +G+  V   TDP A  R 
Sbjct: 123 LTEPQAGSDASSLKTRARLEGDH----YVLNGSKQFITSGQNAGVVIVFAVTDPEAGKR- 177

Query: 184 QGMSIVLVEP-GPGLTVSRDLPKLGYKGVESCELSFDNLRVPVSAILGGAMGQGFSQMMK 242
            G+S  +V    PG  V+R   KLG    ++C++ FDN++VPV+  LG A G+G+   + 
Sbjct: 178 -GISAFIVPTDSPGYQVARVEDKLGQHASDTCQIVFDNVQVPVANRLG-AEGEGYKIALA 235

Query: 243 GLETGRIQVAARALGVATAALEDSLAYAQQRESFGRPIWQHQAVGNYLADMATKLTAARQ 302
            LE GRI +A++A+G+A AA E +  YA +R+SFG+P+ +HQAV   LADMATK++ ARQ
Sbjct: 236 NLEGGRIGIASQAVGMARAAFEVARDYANERQSFGKPLIEHQAVAFRLADMATKISVARQ 295

Query: 303 LTRYAAERYDSGQRCDMEAGMAKLFASEVAMEIALNAVRIHGGYGYSTEYDVER 356
           +  +AA   D+G+   +EA MAKLFASE+A ++  +A++  GGYGY +++ +ER
Sbjct: 296 MVLHAAALRDAGRPALVEASMAKLFASEMAEKVCSDALQTLGGYGYLSDFPLER 349