Pairwise Alignments

Query, 838 a.a., DNA gyrase (subunit A) GyrA (DNA topoisomerase (ATP-hydrolysing)) (DNA topoisomerase II) (type II DNA topoisomerase) from Mycobacterium tuberculosis H37Rv

Subject, 878 a.a., DNA gyrase subunit A (EC 5.99.1.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  742 bits (1915), Expect = 0.0
 Identities = 392/862 (45%), Positives = 564/862 (65%), Gaps = 44/862 (5%)

Query: 10  DSLDRIEPVDIEQEMQRSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYAMFDSGFRPDRS 69
           D    I PV+IE+E++ SY+DYAMSVIVGRALP+VRDGLKPVHRRVLYAM   G   +++
Sbjct: 3   DLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKA 62

Query: 70  HAKSARSVAETMGNYHPHGDASIYDSLVRMAQPWSLRYPLVDGQGNFGSPGNDPPAAMRY 129
           + KSAR V + +G YHPHGD+++YD++VRMAQP+SLRY LVDGQGNFGS   D  AAMRY
Sbjct: 63  YKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRY 122

Query: 130 TEARLTPLAMEMLREIDEETVDFIPNYDGRVQEPTVLPSRFPNLLANGSGGIAVGMATNI 189
           TE RL  +A E++ ++++ETVDF+ NYDG  + P V+P++ PNLL NGS GIAVGMATNI
Sbjct: 123 TEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNI 182

Query: 190 PPHNLRELADAVFWALENHDADEEETLAAVMGRVKGPDFPTAGLIVGSQGTADAYKTGRG 249
           PPHNL E+ +     ++N D     ++  +M  + GPDFPTA +I G +G  +AY+TGRG
Sbjct: 183 PPHNLTEVINGCLAYIDNEDI----SIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRG 238

Query: 250 SIRMRGVVEVEEDSR-GRTSLVITELPYQVNHDNFITSIAEQVRDGKLAGISNIEDQSSD 308
            + +R   EVE D++ GR ++++ E+PYQVN    I  IAE V+D ++ GIS + D+ SD
Sbjct: 239 KVYIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDE-SD 297

Query: 309 RVGLRIVIEIKRDAVAKVVINNLYKHTQLQTSFGANMLAIVDGVPRTLRLDQLIRYYVDH 368
           + G+RIVIE+KRDAV +VV+NNLY  TQLQ SFG NM+A+  G P+ + L  +I  +V H
Sbjct: 298 KDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRH 357

Query: 369 QLDVIVRRTTYRLRKANERAHILRGLVKALDALDEVIALIRASETVDIARAGLI------ 422
           + +V+ RRT + LRKA +RAHIL  L  AL  +D +I LIR + T   A+A LI      
Sbjct: 358 RREVVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDL 417

Query: 423 -----------------ELLD-----------IDEIQAQAILDMQLRRLAALERQRIIDD 454
                            E L+           + E QAQAILD++L++L  LE ++++D+
Sbjct: 418 GNVAAMLERAGDDAARPEWLEPEFGVRDGQYYLTEQQAQAILDLRLQKLTGLEHEKLLDE 477

Query: 455 LAKIEAEIADLEDILAKPERQRGIVRDELAEIVDRHGDDRRTRIIAADGDVSDEDLIARE 514
             ++  +IA+L  IL   +R   ++R+E+  I D+ GD+RRT I A   D++ EDLI++E
Sbjct: 478 YKELLEQIAELLHILGSADRLMEVIREEMELIRDQFGDERRTEITANSADINIEDLISQE 537

Query: 515 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQG 574
           DVVVT++  GY K      Y +Q+RGGKG   A +K++D +    V +THD IL F+++G
Sbjct: 538 DVVVTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRG 597

Query: 575 RVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKK 634
           R+Y  K Y LPEASR ARG+ + NLL  +  ERI  ++ +R Y +   + +AT +G VKK
Sbjct: 598 RLYWMKVYQLPEASRGARGRPIVNLLPLEANERITAILPVREYEEGVNVFMATASGTVKK 657

Query: 635 SKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMG 694
           + LT+F   RS GI+AVNL D DEL+G  L S  D+++L SA G+ +RF   ++A+R MG
Sbjct: 658 TALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFK--EDAVRAMG 715

Query: 695 RATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVM 754
           R  +GV+G++   DD+++SL + R    +L  T  GY KRTA +EYP + R  +GV+++ 
Sbjct: 716 RTATGVRGIKLAGDDKVVSLIIPRGEGAILTVTQNGYGKRTAADEYPTKSRATQGVISIK 775

Query: 755 YDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQVRKAGRQTKGVRLMNLGEGDTLLA 814
              R G +VGA+ VDD  ++  +T  G ++RT   ++   GR T+GV L+   E + ++ 
Sbjct: 776 VTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAEDENVVG 835

Query: 815 IARNAEESGDD--NAVDANGAD 834
           + R AE   D+  +A+D + A+
Sbjct: 836 LQRVAEPVDDEELDAIDGSVAE 857