Pairwise Alignments

Query, 838 a.a., DNA gyrase (subunit A) GyrA (DNA topoisomerase (ATP-hydrolysing)) (DNA topoisomerase II) (type II DNA topoisomerase) from Mycobacterium tuberculosis H37Rv

Subject, 877 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Dickeya dadantii 3937

 Score =  753 bits (1945), Expect = 0.0
 Identities = 395/851 (46%), Positives = 562/851 (66%), Gaps = 42/851 (4%)

Query: 10  DSLDRIEPVDIEQEMQRSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYAMFDSGFRPDRS 69
           D    I PV+IE+E++ SY+DYAMSVIVGRALP+VRDGLKPVHRRVLYAM   G   ++ 
Sbjct: 3   DLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWNKP 62

Query: 70  HAKSARSVAETMGNYHPHGDASIYDSLVRMAQPWSLRYPLVDGQGNFGSPGNDPPAAMRY 129
           + KSAR V + +G YHPHGD+++YD++VRMAQP+SLRY LVDGQGNFGS   D  AAMRY
Sbjct: 63  YKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRY 122

Query: 130 TEARLTPLAMEMLREIDEETVDFIPNYDGRVQEPTVLPSRFPNLLANGSGGIAVGMATNI 189
           TE R++ +A E+L ++++ETVDF+PNYDG  Q P V+P+R PNLL NGS GIAVGMATNI
Sbjct: 123 TEVRMSKIAHELLSDLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMATNI 182

Query: 190 PPHNLRELADAVFWALENHDADEEETLAAVMGRVKGPDFPTAGLIVGSQGTADAYKTGRG 249
           PPHNL E+ D     ++    DE  ++  +M  + GPDFPTA +I G +G  +AY+TGRG
Sbjct: 183 PPHNLSEVIDGCLAYID----DENISVEGLMTHIPGPDFPTAAIINGKRGIEEAYRTGRG 238

Query: 250 SIRMRGVVEVEEDSR-GRTSLVITELPYQVNHDNFITSIAEQVRDGKLAGISNIEDQSSD 308
            + +R   EVE D++ GR ++++ E+PYQVN    I  IAE V++ ++ GIS + D+S D
Sbjct: 239 KVYIRARAEVEADAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRIEGISALRDES-D 297

Query: 309 RVGLRIVIEIKRDAVAKVVINNLYKHTQLQTSFGANMLAIVDGVPRTLRLDQLIRYYVDH 368
           + G+RIVIEIKRDAV +VV+N+LY  TQ+Q SFG NM+A+  G P+ + L +++  +V H
Sbjct: 298 KDGMRIVIEIKRDAVGEVVLNHLYSQTQMQVSFGINMVALHQGQPKLMTLKEILSAFVRH 357

Query: 369 QLDVIVRRTTYRLRKANERAHILRGLVKALDALDEVIALIRASETVDIARAGLI------ 422
           + +V+ RRT + LRKA ERAHIL GL  AL  +D +I LIR + T   A+A L+      
Sbjct: 358 RREVVTRRTIFELRKARERAHILEGLAIALANIDPIIELIRHASTPADAKAALVAQAWAL 417

Query: 423 -----------------ELLD-----------IDEIQAQAILDMQLRRLAALERQRIIDD 454
                            E L+           + E+QAQAILD++L++L  LE ++++D+
Sbjct: 418 GGVAAMLERAGDDAARPEWLEPEFGIHDGYYHLTELQAQAILDLRLQKLTGLEHEKLLDE 477

Query: 455 LAKIEAEIADLEDILAKPERQRGIVRDELAEIVDRHGDDRRTRIIAADGDVSDEDLIARE 514
             ++ A+IA+L  IL  PER   ++R+EL  I +++ D RRT I     D++ EDLI++E
Sbjct: 478 YKELLAQIAELLFILRSPERLMEVIREELVAIREQYNDARRTEITHNSADINIEDLISQE 537

Query: 515 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQG 574
           +VVVT++  GY K      Y +Q+RGGKG   A +K++D +    V +THD IL F+++G
Sbjct: 538 NVVVTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRG 597

Query: 575 RVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKK 634
           R+Y  K Y LPEASR ARG+ + NLL  +P+ERI  ++ +R Y +   + +AT +G VKK
Sbjct: 598 RLYWLKVYQLPEASRGARGRPIINLLPLEPDERITAILPVREYEEGMNVFMATASGTVKK 657

Query: 635 SKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMG 694
           + LT+F   RS GI+AVNL D DEL+G  L    ++++L SA G+ +RFS  + A+R MG
Sbjct: 658 TALTEFSRPRSAGIIAVNLNDGDELIGVDLTDGSNEVMLFSAEGKVVRFS--ESAVRTMG 715

Query: 695 RATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVM 754
           R  +GV+G+    DDR++SL V R    +L  T  G+ KRTA+ EYPV+ R  KGV+++ 
Sbjct: 716 RTATGVRGINLQDDDRVVSLIVPRGEGDILTVTQNGFGKRTAVTEYPVKSRATKGVISIK 775

Query: 755 YDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQVRKAGRQTKGVRLMNLGEGDTLLA 814
              R G++VGA+ VD   ++  +T  G ++RT   +V   GR T+GV L+   E + ++ 
Sbjct: 776 VSERNGKVVGAVQVDSADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDEQVVG 835

Query: 815 IARNAEESGDD 825
           + R AE   DD
Sbjct: 836 LQRVAEPVEDD 846