Pairwise Alignments

Query, 838 a.a., DNA gyrase (subunit A) GyrA (DNA topoisomerase (ATP-hydrolysing)) (DNA topoisomerase II) (type II DNA topoisomerase) from Mycobacterium tuberculosis H37Rv

Subject, 906 a.a., DNA gyrase subunit A from Agrobacterium fabrum C58

 Score =  648 bits (1672), Expect = 0.0
 Identities = 373/900 (41%), Positives = 526/900 (58%), Gaps = 91/900 (10%)

Query: 24  MQRSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYAMFDSGFRPDRSHAKSARSVAETMGN 83
           MQRSY+DYAMSVIV RALP+VRDGLKPVHRR+LY M + G   ++ + K AR   + MG 
Sbjct: 1   MQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYGMSELGIDWNKKYVKCARVTGDVMGK 60

Query: 84  YHPHGDASIYDSLVRMAQPWSLRYPLVDGQGNFGSPGNDPPAAMRYTEARLTPLAMEMLR 143
           +HPHG+++IYD+L RMAQ WSLR PL+DGQGNFGS   DPPAA RYTE RL   A  +L 
Sbjct: 61  FHPHGNSAIYDALARMAQDWSLRLPLIDGQGNFGSIDGDPPAAERYTECRLEKAAHSLLD 120

Query: 144 EIDEETVDFIPNYDGRVQEPTVLPSRFPNLLANGSGGIAVGMATNIPPHNLRELADAVFW 203
           ++D+ETVDF  NYDG +QEP V+P++FPNLL NG+GGIAVGMATNIPPHNL E+ D    
Sbjct: 121 DLDKETVDFRDNYDGTLQEPVVVPAKFPNLLVNGAGGIAVGMATNIPPHNLSEVIDGCVA 180

Query: 204 ALENHDADEEETLAAVMGRVKGPDFPTAGLIVGSQGTADAYKTGRGSIRMRGVVEVEEDS 263
            +EN   +    L  +M  + GPDFPT  LI+G  G   AY+TGRGS+ MRGV  +E   
Sbjct: 181 LIENPAIE----LPEMMQIIPGPDFPTGALIMGRSGIRSAYETGRGSVIMRGVATIEPMR 236

Query: 264 RGRTSLVITELPYQVNHDNFITSIAEQVRDGKLAGISNIEDQSSDRVGLRIVIEIKRDAV 323
             R  ++ITE+PYQVN  + I  +AE V++ ++ GIS++ D+ SDR G R+VIE+KRDA 
Sbjct: 237 GDREQIIITEVPYQVNKASMIEKMAELVKEKRIEGISDLRDE-SDRQGYRVVIELKRDAN 295

Query: 324 AKVVINNLYKHTQLQTSFGANMLAIVDGVPRTLRLDQLIRYYVDHQLDVIVRRTTYRLRK 383
           A+V++N LY++T LQTSFG NM+A+  G P  + L  ++R +V  + DV+ RRT Y LRK
Sbjct: 296 AEVILNQLYRYTPLQTSFGCNMVALNGGKPEQMTLLDMLRAFVSFREDVVSRRTKYLLRK 355

Query: 384 ANERAHILRGLVKALDALDEVIALIRASETVDIAR-------------AGLIELLD---- 426
           A +RAH+L GL  ++  +DEVI +IR +     AR               LI L+D    
Sbjct: 356 ARDRAHVLVGLAISVANIDEVIRVIRHAPDPASAREQLMTRRWPAQDVESLIRLIDDPRH 415

Query: 427 ---------IDEIQAQAILDMQLRRLAALERQRIIDDLAKIEAEIADLEDILAKPERQRG 477
                    + E QA+AIL+++L RL AL R  I D+L KI AEI++  DIL+   R + 
Sbjct: 416 RINEDGTYNLSEEQARAILELRLARLTALGRDEIGDELNKIGAEISEYLDILSSRVRIQQ 475

Query: 478 IVRDELAEIVDRHGDDRRTRIIAADGDVSDEDLIAREDVVVTITETGYAKRTKTDLYRSQ 537
           IV+DEL  I D  G  RR++I+    D+ DEDLIARED+VVT++  GY KR     YR+Q
Sbjct: 476 IVKDELVSIRDEFGTPRRSQIVEGGPDMDDEDLIAREDMVVTVSHLGYIKRVPLTTYRAQ 535

Query: 538 KRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVA 597
           +RGGKG  G   + +D V   FV +TH  +LFF+++G VY+ K + LP  +  ++G+ + 
Sbjct: 536 RRGGKGRSGMATRDEDFVNRLFVANTHTPVLFFSSRGIVYKEKVWRLPIGTPQSKGKALI 595

Query: 598 NLLAFQPEERIAQVIQI---RGYTDAPYLVLATRNGLVKKSKLTDF-DSNRSGGIVAVNL 653
           N+L  +P ERI  ++ +       +   ++ +T  G V+++KL DF   NR+G I     
Sbjct: 596 NMLPLEPGERITTIMPLPEDETAWETLDVMFSTTRGTVRRNKLGDFVQVNRNGKIAMKLD 655

Query: 654 RDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLS 713
            + DE++    C+  DD+LL +A GQ IRF   D  +   GR + GV+G+     DR++S
Sbjct: 656 EEGDEILSVETCTDRDDVLLTTALGQCIRFPVDDVRVF-AGRNSVGVRGINMAEGDRIIS 714

Query: 714 LNVV--------REGTYL------------------------------------------ 723
           + +V            YL                                          
Sbjct: 715 MTIVGHVEAEPWERAAYLKRSATERRAAGVDEEDIALVGEEVTEEGELSEERYQELKARE 774

Query: 724 ---LVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRR--GRLVGALIVDDDSELYAVT 778
              L  +  G+ KR++  ++   GRGGKG+      +    G LV A  V++  ++  V+
Sbjct: 775 EFVLTVSVKGFGKRSSSYDFRTSGRGGKGIRATDTAKTNEIGELVAAFPVEEGDQIMLVS 834

Query: 779 SGGGVIRTAARQVRKAGRQTKGVRLMNLGEGDTLLAIARNAEESGDDNAVDANGADQTGN 838
            GG +IR     +R A R TKGV + +  + + ++++ R  E  GDD A + N  +   N
Sbjct: 835 DGGQLIRVPVNGIRIASRATKGVTIFSTAKDEKVVSVERINEPEGDDEAENGNDDEADDN 894