Pairwise Alignments

Query, 412 a.a., serine hydroxymethyltransferase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 422 a.a., serine hydroxymethyltransferase from Agrobacterium fabrum C58

 Score =  473 bits (1217), Expect = e-138
 Identities = 248/411 (60%), Positives = 301/411 (73%), Gaps = 6/411 (1%)

Query: 6   IQDPEVGRAVTLEIERQTGKLELIASENFVSAAVRQAQGSVLTHKYAEGYPGKRYYGGCE 65
           + D  +  A+  E++RQ  ++ELIASEN VSA V  AQGSVLT+KYAEGYPGKRYYGGCE
Sbjct: 10  VSDTVIADAIAEELDRQKTQIELIASENIVSADVLAAQGSVLTNKYAEGYPGKRYYGGCE 69

Query: 66  FVDIAENLAIDRAKAIFGCGYANVQPHSGSQANMGVYFACLKPGDTILGMNLSHGGHLTH 125
           FVD  E +AIDR K +FG  +ANVQPHSG+QAN  V+ A L+PGD I+G++L+HGGHLTH
Sbjct: 70  FVDKVEQVAIDRLKQLFGAEFANVQPHSGAQANQAVFLALLQPGDRIMGLSLAHGGHLTH 129

Query: 126 GSPVNFSGRLYNVVFYGVKKETGYIDYDEVAALAREHKPTLIVAGASAYPRTIDFARFRA 185
           GSPV  SG+ ++VV Y V  ET  ID ++V   A E KP LIVAGASAYPR IDFA FR 
Sbjct: 130 GSPVTMSGKWFDVVSYEVDPETHLIDMEKVREKALETKPKLIVAGASAYPRQIDFAGFRE 189

Query: 186 IADEVGAKLMVDMAHIAGLVATGLHPTPIGQAHFTTTTTHKTLRGPRGGMIL-SDEDNAK 244
           IADEVGA LMVDMAH AGL+A G +P  +  AH TT+TTHKTLRGPRGG+IL +D D AK
Sbjct: 190 IADEVGAYLMVDMAHYAGLIAGGHYPNAVPHAHVTTSTTHKTLRGPRGGVILTNDADLAK 249

Query: 245 TLNSQIFPGIQGGPLMHVIAAKAVAFGEALRPTFVDYQQQVVKNAARLAGCLTAAGYDLV 304
            LNS +FPG QGGPLMHVIAAKAVAFGEALRP F DY  QV+ NA  LA  L   G  +V
Sbjct: 250 KLNSAVFPGNQGGPLMHVIAAKAVAFGEALRPEFSDYAGQVIANAQALAKVLIQGGLGIV 309

Query: 305 SGGTDNHLMLMDLTAKDITGKDAEHALDKAGMTANKNTVPFETRSPFVTSGVRLGTPALT 364
           SGGTD+H++L+DL  K +TGK AE AL++AG+T NKN++P +   PFVTSG+RLG+ A T
Sbjct: 310 SGGTDSHMVLVDLRPKGVTGKIAEIALERAGLTCNKNSIPNDPEKPFVTSGIRLGSSAGT 369

Query: 365 TRGMKEAEMEKVAAWI---VDALA-NVNNETRL-AAISREVEVFARQFPLF 410
           TRG    E EK+ A I   +DALA N   ++ + A +  EV      FP++
Sbjct: 370 TRGFGVLEFEKIGALILRVIDALATNAEGDSAVEAEVREEVAALCEAFPIY 420