Pairwise Alignments

Query, 351 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 383 a.a., tRNA-specific 2-thiouridylase MnmA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  199 bits (505), Expect = 1e-55
 Identities = 134/364 (36%), Positives = 188/364 (51%), Gaps = 23/364 (6%)

Query: 2   KIAVALSGGTDSLFALLLLLEQGQDVFGLHARFLPPRADQP--SGNPDPAEAIGAMCARL 59
           ++ V LSGG DS  +  LL +QG +V G+  +      D    S   D  +A  ++   L
Sbjct: 6   RVVVGLSGGVDSAVSAYLLKQQGYEVIGIFMKNWEDDDDSEYCSTRQDFLDA-ASVADVL 64

Query: 60  GVDFHAVDLADAFEEAVVAPFIEEYVVGRTPNPCARCNATMKFGLLLDAARALGAARLAT 119
           G+D   V+ A  +++ V A F+ EY  GRTPNP   CNA +KF   LD A  LGA ++AT
Sbjct: 65  GIDIEHVNFAAEYKDRVFAEFLREYQAGRTPNPDILCNAEIKFKAFLDHAMRLGAEKIAT 124

Query: 120 GHYVRQLRHPQWGMTLQRGADPAKDQSYFLSLVDRARLEQAVFPLGNWRKEQVKAELVKR 179
           GHY R +R       L +G DP KDQSYFL  +++A+L + +FP+G   K +V+    + 
Sbjct: 125 GHYAR-VRERAGAFELLKGRDPLKDQSYFLHRLNQAQLAKTLFPVGELPKTEVRRIAAEI 183

Query: 180 NIVPPLPSESQEICFVPGDDYRAFLRDRQVRLPGPGPIVTMRGRKIGSHKGLWQYTEGQR 239
           N+      +S  ICF+    +R FL   +     PGPI   +GR +G H GL  YT GQR
Sbjct: 184 NLPNAKKKDSTGICFIGERPFRDFL--NRYIAKEPGPIKDAKGRVLGQHVGLSFYTLGQR 241

Query: 240 RGLGIAW------------EEPLYVVSKDMENNVL-LVGGREH--LAARGCLTEDVNLLV 284
           +GLGI                P +V  KD+E N L +V G +H  L       +D + + 
Sbjct: 242 QGLGIGGVREKGAQKGGNDHAPWFVARKDVEKNTLWVVQGHDHPWLLTPRLRAQDASWVA 301

Query: 285 DPADWPAEISVRTRYRQAPQPARVTV-GDTGMAVRFREPQTPPARGQVAAVYDAEGHVLA 343
                 A ++ +TRYRQA  P R    G++G A+ F +PQ     GQ A +YD E   L 
Sbjct: 302 GRPPEAAALAAKTRYRQADAPCRFEAEGESGFALDFTDPQWAVTPGQSAVLYDGE-VCLG 360

Query: 344 GGVI 347
           GGVI
Sbjct: 361 GGVI 364