Pairwise Alignments

Query, 351 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 368 a.a., tRNA-specific 2-thiouridylase MnmA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  192 bits (488), Expect = 1e-53
 Identities = 138/360 (38%), Positives = 191/360 (53%), Gaps = 20/360 (5%)

Query: 2   KIAVALSGGTDSLFALLLLLEQGQDVFGLHARFLPPRADQP--SGNPDPAEAIGAMCARL 59
           K+ V +SGG DS  +  LL +QG  V GL  +       +   +   D A+A  A+C +L
Sbjct: 7   KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADA-QAVCDKL 65

Query: 60  GVDFHAVDLADAFEEAVVAPFIEEYVVGRTPNPCARCNATMKFGLLLD-AARALGAARLA 118
           G++ H V+ A  + + V   F+EEY  GRTPNP   CN  +KF   L+ AA  LGA  +A
Sbjct: 66  GIELHTVNFAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125

Query: 119 TGHYVRQLRHPQWGMTLQRGADPAKDQSYFLSLVDRARLEQAVFPLGNWRKEQVKAELVK 178
           TGHYVR+         L RG D  KDQSYFL  +   ++ Q++FP+G   K QV+     
Sbjct: 126 TGHYVRR-ADVNGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKPQVRKIAED 184

Query: 179 RNIVPPLPSESQEICFVPGDDYRAFLRDRQVRLPG-PGPIVTMRGRKIGSHKGLWQYTEG 237
             +V     +S  ICF+    +R FL      LP  PG I+T+ G +IG H+GL  +T G
Sbjct: 185 LGLVTAKKKDSTGICFIGERKFRDFLGR---YLPAQPGKIITVDGDEIGEHQGLMYHTLG 241

Query: 238 QRRGLGIAW-----EEPLYVVSKDMENNVLLVG-GREH--LAARGCLTEDVNLL-VDPAD 288
           QR+GLGI       E+P YVV KD+ENNVL+V  G EH  L + G + + ++ +  +P  
Sbjct: 242 QRKGLGIGGTKDGSEDPWYVVDKDVENNVLIVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301

Query: 289 WPAEISVRTRYRQAPQPARV-TVGDTGMAVRFREPQTPPARGQVAAVYDAEGHVLAGGVI 347
                +V+TRYRQ   P  +  + D  + V F EP      GQ A  Y  E   L GG+I
Sbjct: 302 GTLRCTVKTRYRQTDIPCTINALNDDRIEVIFDEPVAAVTPGQSAVFYSGE-VCLGGGII 360