Pairwise Alignments

Query, 351 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 368 a.a., tRNA(Gln,Lys,Glu) U34 2-thiouridylase from Escherichia coli BL21

 Score =  192 bits (487), Expect = 2e-53
 Identities = 138/360 (38%), Positives = 191/360 (53%), Gaps = 20/360 (5%)

Query: 2   KIAVALSGGTDSLFALLLLLEQGQDVFGLHARFLPPRADQP--SGNPDPAEAIGAMCARL 59
           K+ V +SGG DS  +  LL +QG  V GL  +       +   +   D A+A  A+C +L
Sbjct: 7   KVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADA-QAVCDKL 65

Query: 60  GVDFHAVDLADAFEEAVVAPFIEEYVVGRTPNPCARCNATMKFGLLLD-AARALGAARLA 118
           G++ H V+ A  + + V   F+ EY  GRTPNP   CN  +KF   L+ AA  LGA  +A
Sbjct: 66  GIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125

Query: 119 TGHYVRQLRHPQWGMTLQRGADPAKDQSYFLSLVDRARLEQAVFPLGNWRKEQVKAELVK 178
           TGHYVR+         L RG D  KDQSYFL  +   ++ Q++FP+G   K QV+     
Sbjct: 126 TGHYVRR-ADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAED 184

Query: 179 RNIVPPLPSESQEICFVPGDDYRAFLRDRQVRLPG-PGPIVTMRGRKIGSHKGLWQYTEG 237
             +V     +S  ICF+    +R FL      LP  PG I+T+ G +IG H+GL  +T G
Sbjct: 185 LGLVTAKKKDSTGICFIGERKFREFLGR---YLPAQPGKIITVDGDEIGEHQGLMYHTLG 241

Query: 238 QRRGLGI-----AWEEPLYVVSKDMENNVLLVG-GREH--LAARGCLTEDVNLL-VDPAD 288
           QR+GLGI       EEP YVV KD+ENN+L+V  G EH  L + G + + ++ +  +P  
Sbjct: 242 QRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFT 301

Query: 289 WPAEISVRTRYRQAPQPARV-TVGDTGMAVRFREPQTPPARGQVAAVYDAEGHVLAGGVI 347
                +V+TRYRQ   P  V  + D  + V F EP      GQ A  Y+ E   L GG+I
Sbjct: 302 GTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGE-VCLGGGII 360