Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 639 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  187 bits (474), Expect = 2e-51
 Identities = 112/292 (38%), Positives = 168/292 (57%)

Query: 382 QARIEEQHARIARAAEAARQVSARVSSASGELSEQVEEASSGADEQRGLAVESASAMEQM 441
           Q  I+     +       R    +++SA+ ELS   E+ S+G + Q+    + A+AM +M
Sbjct: 347 QQGIQRMGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKIETDQVATAMHEM 406

Query: 442 NASVMEVASNAGSAADLAGTAHEQARQGSVVVEEAVACINRVAEQARVLEHDMGELGTQA 501
            A+V EVA NA  A+  A  A  QAR G  VV EA+A I R+A +       M  L  ++
Sbjct: 407 TATVQEVARNAEQASLAAADADGQARAGDKVVAEAIAQIERLAAEVARSTDAMTHLQQES 466

Query: 502 EGVGRIIGVIEDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMQATREVV 561
             +G ++ VI+ +A+QTNLLALNAAIEAARAG+AGRGFAVVADEVR LA++T ++T E+ 
Sbjct: 467 NKIGSVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIE 526

Query: 562 GFVEAIRTGVARSRSATDEAVRLVAQSTGLAGRSGEALLAIVGTVDRTADQVRAIATAAE 621
           G V  ++ G  +  +  + +  L   S  L  ++G +L  I  TV       + IA AAE
Sbjct: 527 GLVAGLQNGTQQVANVMNNSRSLTDSSVELTRKAGVSLENITRTVSNIQSMNQQIAAAAE 586

Query: 622 QQSAASEQITRAVDRISTISGHTADSMRHSAGAVSDLARLAQELDAIIDDMR 673
           QQSA +E+I+R++  +  +S  TA +   +A +  +LARL  +L  ++   R
Sbjct: 587 QQSAVAEEISRSIVNVRDVSEQTATASDETAKSSVELARLGSQLQQMVSHFR 638



 Score = 54.7 bits (130), Expect = 1e-11
 Identities = 87/360 (24%), Positives = 142/360 (39%), Gaps = 51/360 (14%)

Query: 198 LVALLAGVI--LFIRRAIVDRVQRITDASTAIAGGDLNADLAVGGHDELARLAANLHGMV 255
           L+ALL GVI  L I R I   +Q        IA GDL+ ++ V   DEL  L   +  M 
Sbjct: 295 LLALLVGVIAALVITRQITRPIQETLAVVERIASGDLSHNIQVTRRDELGVLQQGIQRM- 353

Query: 256 GGLKKELGFSKGILNGMT-----LPFLVADTDGRVSYCNTALLHMLGLDGTPEEQTGKTV 310
           G   +EL    GI +G+T        L A T+   +  N+  +    +     E T    
Sbjct: 354 GTTLREL--ISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKIETDQVATAMHEMTATVQ 411

Query: 311 GDLMFGEPQRVTVTDRVLRERAVHTGQRVTLDS-----RKGGQVHVVVDSAPLLDLDGNL 365
                 E   +   D   + RA   G +V  ++     R   +V    D+   L  + N 
Sbjct: 412 EVARNAEQASLAAADADGQARA---GDKVVAEAIAQIERLAAEVARSTDAMTHLQQESNK 468

Query: 366 IGAFSVYTDVTEMQRQQARIEEQHARI--ARAAEAARQVSARVSSASGELSEQVEEASSG 423
           IG+     DV +   +Q  +   +A I  ARA EA R  +                    
Sbjct: 469 IGS---VMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAV------------------V 507

Query: 424 ADEQRGLAVESASAMEQMNASV-------MEVASNAGSAADLAGTAHEQARQGSVVVEEA 476
           ADE RGLA  +  + E++   V        +VA+   ++  L  ++ E  R+  V +E  
Sbjct: 508 ADEVRGLAQRTQKSTEEIEGLVAGLQNGTQQVANVMNNSRSLTDSSVELTRKAGVSLENI 567

Query: 477 VACINRVAEQARVLEHDMGELGTQAEGVGRIIGVIEDIADQTNLLA---LNAAIEAARAG 533
              ++ +    + +     +    AE + R I  + D+++QT   +     +++E AR G
Sbjct: 568 TRTVSNIQSMNQQIAAAAEQQSAVAEEISRSIVNVRDVSEQTATASDETAKSSVELARLG 627