Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 638 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  197 bits (501), Expect = 1e-54
 Identities = 113/269 (42%), Positives = 169/269 (62%)

Query: 405 RVSSASGELSEQVEEASSGADEQRGLAVESASAMEQMNASVMEVASNAGSAADLAGTAHE 464
           +++SA+ +LS   E+ S+G + Q+    + A+AM +M A+V EVA NA  A++ A  A +
Sbjct: 369 QIASAAEQLSAVTEQTSAGVNSQKVETDQVATAMNEMAATVQEVARNAEEASEAAVAADQ 428

Query: 465 QARQGSVVVEEAVACINRVAEQARVLEHDMGELGTQAEGVGRIIGVIEDIADQTNLLALN 524
           QAR+G  VV EA+A I R+A +       MG+L  +++ +G ++ VI+ +A QTNLLALN
Sbjct: 429 QAREGDKVVGEAIAQIERLATEVGNSTVAMGDLKRESDKIGSVLDVIKSVAQQTNLLALN 488

Query: 525 AAIEAARAGDAGRGFAVVADEVRKLAEKTMQATREVVGFVEAIRTGVARSRSATDEAVRL 584
           AAIEAARAG+AGRGFAVVADEVR LA++T ++T E+   +  +++G  +  +  D +  L
Sbjct: 489 AAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEELIVGLQSGTQQVATIMDNSRGL 548

Query: 585 VAQSTGLAGRSGEALLAIVGTVDRTADQVRAIATAAEQQSAASEQITRAVDRISTISGHT 644
              S  L  R+G AL +I  TV         IATAAEQQSA +E+I R+V  +  +S  T
Sbjct: 549 TDSSVELPRRAGSALASITRTVSTIQAMNSQIATAAEQQSAVAEEINRSVLNVRDVSEQT 608

Query: 645 ADSMRHSAGAVSDLARLAQELDAIIDDMR 673
           A +   +A + ++LARL   L A++   R
Sbjct: 609 AAASEETAASSTELARLGTHLQALVGRFR 637



 Score = 49.3 bits (116), Expect = 6e-10
 Identities = 70/338 (20%), Positives = 128/338 (37%), Gaps = 31/338 (9%)

Query: 196 AGLVALLAGVILF--IRRAIVDRVQRITDASTAIAGGDLNADLAVGGHDELARLAANLHG 253
           A ++AL+ G++    I R IV  + +    +  +A GDL+ +L     DEL +L   +  
Sbjct: 292 ATVLALIFGLVAAWAITRQIVIPLNQTLQVAQRVASGDLSHNLTSMRQDELGQLQRAMQS 351

Query: 254 MVGGLKKELGFSKGILNGMTLPFLVADTDGRVSYCNTALLHMLGLD----GTPEEQTGKT 309
           M  GL++ +G   GI +G+T     A+    V+   +A ++   ++     T   +   T
Sbjct: 352 MTVGLRELIG---GISDGVTQIASAAEQLSAVTEQTSAGVNSQKVETDQVATAMNEMAAT 408

Query: 310 VGDLMFG---EPQRVTVTDRVLRERAVHTGQRVT----LDSRKGGQVHVVVDSAPLLDLD 362
           V ++        +     D+  RE     G+ +     L +  G     + D     D  
Sbjct: 409 VQEVARNAEEASEAAVAADQQAREGDKVVGEAIAQIERLATEVGNSTVAMGDLKRESDKI 468

Query: 363 GNLIGAFSVYTDVTEMQRQQARIEEQHA-----RIARAAEAARQVSARVSSASGELSEQV 417
           G+++         T +    A IE   A       A  A+  R ++ R   ++ E+ E +
Sbjct: 469 GSVLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEELI 528

Query: 418 EEASSGA-------DEQRGLAVESASAMEQMNASVMEVASNAGSAADLAGTAHEQARQGS 470
               SG        D  RGL   S     +  +++  +     +   +       A Q S
Sbjct: 529 VGLQSGTQQVATIMDNSRGLTDSSVELPRRAGSALASITRTVSTIQAMNSQIATAAEQQS 588

Query: 471 VVVEE---AVACINRVAEQARVLEHDMGELGTQAEGVG 505
            V EE   +V  +  V+EQ      +     T+   +G
Sbjct: 589 AVAEEINRSVLNVRDVSEQTAAASEETAASSTELARLG 626