Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 527 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  367 bits (942), Expect = e-106
 Identities = 213/488 (43%), Positives = 295/488 (60%), Gaps = 1/488 (0%)

Query: 185 GRILESAGISAAGLVALLAGVILFIRRAIVDRVQRITDASTAIAGGDLNADLAVGGHDEL 244
           G I  + GI+    V L   +   +   +V  +  IT     +  GD +   A  G DEL
Sbjct: 39  GTIWLAGGITVGCAVMLAVALAFLLHAKVVKPLGEITGRLDRLKAGDHSVCFACDGGDEL 98

Query: 245 ARLAANLHGMVGGLKKELGFSKGILNGMTLPFLVADTDGRVSYCNTALLHMLGLDGTPEE 304
             +   L G++G L++ L F++G+L G+  PF+V D    ++Y NT LLH+L  DG PE 
Sbjct: 99  VEMRIALDGLIGQLRRNLSFAQGVLKGIDTPFVVVDPQEVLTYTNTNLLHILEHDGKPES 158

Query: 305 QTGKTVGDLMFGEPQRVTVTDRVLRERAVHTGQRVTLDSRKGGQVHVVVDSAPLLDLDGN 364
             G+ V    +G+  R TV  R   E      + V L  RKGG+  + ++++PL D++G 
Sbjct: 159 FYGQNVAQFFYGDATRRTVL-RDCIENGTVARREVDLTGRKGGKRRIFINASPLYDIEGK 217

Query: 365 LIGAFSVYTDVTEMQRQQARIEEQHARIARAAEAARQVSARVSSASGELSEQVEEASSGA 424
           L+GA  +Y D+T+++ ++A +E  + RIA AA  + ++S  V+  S  L+ Q+  A S  
Sbjct: 218 LMGALCIYQDLTDLRAREAELEATNRRIAEAARQSEEISGEVARTSATLAGQMRNAGSLT 277

Query: 425 DEQRGLAVESASAMEQMNASVMEVASNAGSAADLAGTAHEQARQGSVVVEEAVACINRVA 484
           D Q     E+A+AM++MN++V+ VA NA  AA  A  A  +A  G+ VVE+A+A I  V+
Sbjct: 278 DRQASRIGETAAAMDEMNSAVLAVARNASDAARQATDARAKAEAGAGVVEKAMAAIGEVS 337

Query: 485 EQARVLEHDMGELGTQAEGVGRIIGVIEDIADQTNLLALNAAIEAARAGDAGRGFAVVAD 544
             A  L+ D+G LGT+AEG+GR++ VI DIADQTNLLALNAAIEAARAGDAGRGFAVVAD
Sbjct: 338 TMAARLKADLGALGTRAEGIGRVMEVISDIADQTNLLALNAAIEAARAGDAGRGFAVVAD 397

Query: 545 EVRKLAEKTMQATREVVGFVEAIRTGVARSRSATDEAVRLVAQSTGLAGRSGEALLAIVG 604
           EVRKLAEKTM ATREV   + AI+ G   S +  + AV  V +S GL+  SG AL  IV 
Sbjct: 398 EVRKLAEKTMNATREVGEAIRAIQEGTRDSVAGMEAAVHAVERSRGLSAESGAALAEIVT 457

Query: 605 TVDRTADQVRAIATAAEQQSAASEQITRAVDRISTISGHTADSMRHSAGAVSDLARLAQE 664
            V  T DQV AIATAAEQQS+ SE I+ +V  +  ISG     +  +  AVS LA +A +
Sbjct: 458 LVVATNDQVHAIATAAEQQSSTSEHISSSVAEVRDISGKVTSEVEQAGRAVSALADMAGQ 517

Query: 665 LDAIIDDM 672
           L  II +M
Sbjct: 518 LRGIIHNM 525



 Score = 37.4 bits (85), Expect = 2e-06
 Identities = 39/184 (21%), Positives = 73/184 (39%), Gaps = 33/184 (17%)

Query: 363 GNLIGAFSVYTDVTEMQRQQARIEEQHAR-----IARAAEAARQVSARVSSASGELSEQV 417
           G ++   S   D T +    A IE   A       A  A+  R+++ +  +A+ E+ E +
Sbjct: 358 GRVMEVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMNATREVGEAI 417

Query: 418 --------------EEASSGADEQRGLAVESASAMEQMNASVMEVASNAGSAADLAGTAH 463
                         E A    +  RGL+ ES +A+ ++   V+       + A    TA 
Sbjct: 418 RAIQEGTRDSVAGMEAAVHAVERSRGLSAESGAALAEIVTLVVATNDQVHAIA----TAA 473

Query: 464 EQARQGSVVVEEAVACINRVAEQARVLEHDMGELGTQAEGVGRIIGVIEDIADQTNLLAL 523
           EQ    S  +  +VA +  ++          G++ ++ E  GR +  + D+A Q   +  
Sbjct: 474 EQQSSTSEHISSSVAEVRDIS----------GKVTSEVEQAGRAVSALADMAGQLRGIIH 523

Query: 524 NAAI 527
           N  +
Sbjct: 524 NMTV 527