Pairwise Alignments

Query, 302 a.a., inner-membrane translocator (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 307 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

 Score =  303 bits (775), Expect = 4e-87
 Identities = 159/304 (52%), Positives = 218/304 (71%), Gaps = 8/304 (2%)

Query: 5   YFWELFFGGLTRGSIYALIALGYTMVYGIIELINFAHGEVYMMGAFTALIVAGALGIYGF 64
           +F++    GLT GS YALIA+GYTMVYGII +INFAHGEVYM+G++ A I    L + G 
Sbjct: 6   HFFQQLVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGLAMMGI 65

Query: 65  PALAILIIAAVVA-VIYCAAYGLTLEKIAYKPLRDAPRLSPLISAIGMSIFLQNYVILAQ 123
            +L +L+ AA +A ++  +AYG ++E++AY+PLR + RL PLISAIGMSIFLQN V+L+Q
Sbjct: 66  HSLPLLMTAAFLASIVVTSAYGYSIERVAYRPLRGSNRLIPLISAIGMSIFLQNTVLLSQ 125

Query: 124 TSDFMPFPNLVPQ-----PDFLEPIAHIMGASEVLIIVTSAISMAALTLFIKYTRMGKAM 178
            S     PNL+P      P   E +  ++   ++L+ V + ++M  LTLFI  +R+G+A 
Sbjct: 126 DSKDKSIPNLIPGSFSFGPGGAEEV--LISYMQILVFVVTLVAMLGLTLFISRSRLGRAC 183

Query: 179 RATAQNRKMAMLLGIDADKVISLTFVIGSSLAAVGGVLIASHVGQVNFAIGFIAGIKAFT 238
           RA A++ KMA LLGI+ + +I+LTFVIG++LAAV  VL++   G +N   GF+ G+KAFT
Sbjct: 184 RACAEDIKMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNAGFLVGLKAFT 243

Query: 239 AAVLGGIGSIPGAMLGGLVLGWCESFATGYISSDYEDALAFALLVLILIFRPSGILGKAK 298
           AAVLGGIGSIPGAMLGGLVLG  E+F        Y+D +AF LLVL+L+FRP+GILG+ +
Sbjct: 244 AAVLGGIGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGILGRPE 303

Query: 299 TQKV 302
            +KV
Sbjct: 304 VEKV 307