Pairwise Alignments

Query, 302 a.a., inner-membrane translocator (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 304 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  283 bits (723), Expect = 5e-81
 Identities = 148/307 (48%), Positives = 208/307 (67%), Gaps = 12/307 (3%)

Query: 4   QYFWELFFGGLTRGSIYALIALGYTMVYGIIELINFAHGEVYMMGAFTALIV-AGALGIY 62
           +YF +    GLT G+IY L+ALGYTMVYG++ +INFAHG +YM+GAF +LI    A  + 
Sbjct: 2   EYFLQQLINGLTLGAIYGLVALGYTMVYGVLGMINFAHGTIYMVGAFISLITFLVATTVL 61

Query: 63  GFPALAILIIAAVVAVIYCAAYGLTLEKIAYKPLRDAPRLSPLISAIGMSIFLQNYVILA 122
           G      L++  V A+   A +G T E++AY+PLR APRL+PLISAIG+SI LQN+V  A
Sbjct: 62  GTSVPLALVLTLVAAMALTALWGWTAERVAYRPLRSAPRLAPLISAIGVSIMLQNFVAQA 121

Query: 123 QTSDFMPFP-------NLVPQPDFLEPIAHIMGASEVLIIVTSAISMAALTLFIKYTRMG 175
           Q +   P P        L+   DF+  ++ +    +++I+  +   MA  T  I  T +G
Sbjct: 122 QGARAKPLPPVFRGGITLMDSGDFVVSLSWM----QMVIMALTLALMAVFTWVITRTALG 177

Query: 176 KAMRATAQNRKMAMLLGIDADKVISLTFVIGSSLAAVGGVLIASHVGQVNFAIGFIAGIK 235
           +A RA  Q+ KMA LLGID D+VIS TFVIG+ LA V G+++  + G ++F IGF+AGIK
Sbjct: 178 RAQRACEQDMKMASLLGIDVDRVISTTFVIGAGLAGVAGMMVTLYYGVIDFYIGFLAGIK 237

Query: 236 AFTAAVLGGIGSIPGAMLGGLVLGWCESFATGYISSDYEDALAFALLVLILIFRPSGILG 295
           AFTAAVLGGIGS+PGAMLGGL++G  E+F + Y S +Y+D   F++LV +L+FRP+G+LG
Sbjct: 238 AFTAAVLGGIGSLPGAMLGGLLIGLIEAFWSAYFSIEYKDVATFSILVAVLVFRPTGLLG 297

Query: 296 KAKTQKV 302
           +   +K+
Sbjct: 298 RPDVEKI 304