Pairwise Alignments

Query, 864 a.a., MscS Mechanosensitive ion channel (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 1108 a.a., Potassium efflux system KefA protein / Small-conductance mechanosensitive channel from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  128 bits (321), Expect = 2e-33
 Identities = 79/261 (30%), Positives = 131/261 (50%), Gaps = 10/261 (3%)

Query: 560  LGLVLLFYLTRSAIAVGTSFLDNLPARLPR-------VERGVIPPLQTGLTYALWALFGL 612
            LG VL+  L      + T  + NLPA L         +  G    + T   Y L  + GL
Sbjct: 831  LGAVLIAILV---FIITTQLVRNLPALLELALLQHLDLTPGTGYAITTITKYLLMLIGGL 887

Query: 613  VVLNALGVSLTSLTVIAGGLSVGLGFGLQTIFNNFFSGLILIFGRSLLEGDIIQIGETWG 672
            V  + +G+  + L  +   L VGLGFGLQ IF NF SGLI++F + +  GD + I +  G
Sbjct: 888  VGFSMIGIEWSKLQWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRDLTG 947

Query: 673  TVRKISIRSTTVETFDNAVIFVPNSEFVSNRLTNWTRNSMRMRRDIAIGVAYGSDIDKVT 732
            +V KI+ R+TT+  +D   I VPN  F++ +  NW+ +    R  + I     ++ ++VT
Sbjct: 948  SVTKINTRATTISDWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTIPAPADANSEEVT 1007

Query: 733  ELLKQAAEDHPRVMRDPAPNVLFQDFGPSSLDFVLRVWVDDLNHGVSTASDLRRTIDRLF 792
            ++L  AA+    V+ +P P +   D       F LR++  ++ H +    ++ + I   F
Sbjct: 1008 QILLTAAQRCSLVLDNPPPEIFLVDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGF 1067

Query: 793  RENAIEISFPQMDVHVRGIEG 813
            RE+ I++ FP   + +  + G
Sbjct: 1068 REHGIDMPFPPFQMRLESLGG 1088



 Score = 28.9 bits (63), Expect = 0.002
 Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 23/173 (13%)

Query: 84  LSTLVEETDRLRKALPDMVKAL----------DSQVAAMQRDYQRLFALY------QLSR 127
           LS L ++ +  R+ L ++ + L           +Q  +MQ +  +L AL       QLS 
Sbjct: 138 LSQLPQQQNDARRQLNEIERRLGAAGGSAALSQAQSLSMQAESAKLKALVDELELAQLSA 197

Query: 128 NHPSEMAAIRRQMAGVQRTLQGRLAPMEATDAAVRQRLDDFTALDKELSEHLATERSSDL 187
           N+  E+A +R ++A  Q         ++A   A+R +L+     + E +   +TE  ++ 
Sbjct: 198 NNRQELARLRSELAEKQS------QQLDAYLQALRNQLNSLRQREAERALE-STELLAEN 250

Query: 188 SKDLSEYLAKLNEGRKNLTTLRTRLARALDPGQAVNAKLTQALEQIDAQLPTL 240
           S  L E + +  +  + L+    + A+ +D   +   + T    Q+   L TL
Sbjct: 251 SAGLPEGIVEQFKVNRELSQALNQQAQRMDLVASQQRQATSQTLQVRQALNTL 303