Pairwise Alignments

Query, 331 a.a., Polyprenyl synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 307 a.a., (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) from Variovorax sp. SCN45

 Score =  114 bits (285), Expect = 3e-30
 Identities = 91/293 (31%), Positives = 133/293 (45%), Gaps = 26/293 (8%)

Query: 4   LKAYLATELPRINKTLDAEVAVLHP-LVRPVAEHVLRAGGKRLRPLLTLLTARALGAEGG 62
           L A+    L  +   L   V V  P L+     + +  GGKRLRPLL L  + A+G    
Sbjct: 17  LAAWCDPHLANVESALSRWVGVDAPVLLGDAMRYAVLDGGKRLRPLLVLAASEAVGGNKA 76

Query: 63  GLFRKSSGPDLYPLACSVELLHSATLLHDDI--LDGADLRRGLPAAHTMFGQTETVLAGD 120
              R          AC+ EL+H+ +L+HDD+  +D   LRRG P  H  FG+ + +LAGD
Sbjct: 77  AALRA---------ACATELIHAYSLVHDDLPCMDNDVLRRGKPTVHVKFGEADALLAGD 127

Query: 121 ALLALANRIVARYGD-------ARLTETIAEAIVQT--ATGEIVEIAHQRSTDHGHDTYI 171
           AL ALA  ++    D       A L   +A A      A G+ +++A             
Sbjct: 128 ALQALAFELLTPEDDEIPAATQALLCRLLARAAGSQGMAGGQAIDLASV-GIALDETRLR 186

Query: 172 DIITGKTAWMLRASCELGALAAQAPDEAVQAAAGFGLNLGIAFQIVDDALDFAASSKDTG 231
           ++   KT  +L+ S E+GA       +A+ A   +G  +G+AFQ+VDD LD  A S+  G
Sbjct: 187 EMHRLKTGALLQGSVEMGAACGSVTPDALAALRDYGAAIGLAFQVVDDILDVTADSQTLG 246

Query: 232 KPVGGDLREGKLTPPLIYYLETLTPQER----DAFVTRFRQGTFDDATVAEVA 280
           K  G D    K T   +  L+    Q R    DA     + G  D + +  +A
Sbjct: 247 KTAGKDAAADKPTYVSLLGLDGARAQARQLLADALAALEKSGLADTSALRALA 299