Pairwise Alignments

Query, 438 a.a., type III secretion system ATPase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 452 a.a., ATP synthase from Pseudomonas simiae WCS417

 Score =  373 bits (958), Expect = e-108
 Identities = 192/419 (45%), Positives = 276/419 (65%), Gaps = 4/419 (0%)

Query: 22  VRGRVEQVVGTIIRAVVPGVKVGELCILRNP--WENWTLRAEVVGFVKQVALLTPLGDLQ 79
           + GR+ ++VG  + A      +G  C++ N   +    + AEV+GF      L P+G L 
Sbjct: 27  LEGRLLRMVGLTLEAEGLRAAMGSRCMVINDDSYHPVQVEAEVMGFSGSKIFLMPVGSLA 86

Query: 80  GVSPATEVIPTGEILSIPVGEDLLGRVLDGLGEPMDGGPPLKPRTRYPVYAQPPNPMQRR 139
           G++P   V+P  +   +P+G  +LGRVLDG G  +DG   +K     P+     NP+ R 
Sbjct: 87  GIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRALDGKGGMKAEDWVPMDGPTINPLNRN 146

Query: 140 IIDRPISLGLRVLDGVLTCGEGQRMGIFAAAGGGKSTLLSSIIKGCSADVCVLALIGERG 199
            I  P+ +G+R ++G+LT G GQR+G+FA  G GKS LL  + +   AD+ V+ LIGERG
Sbjct: 147 PISVPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEADIIVVGLIGERG 206

Query: 200 REVREFIEHDLGPEGRKKAVLVVSTSDRSSMERLKAAYTATAIAEYFRDQRRSVLLMMDS 259
           REV+EFIEH LG EG K++V+V S +D + + RL+AA   T IAEYFRD+ ++VLL+MDS
Sbjct: 207 REVKEFIEHSLGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRDKGKNVLLLMDS 266

Query: 260 VTRFGRAQREIGLAAGEPPTRRGFPPSVFSTLPRLMERAGNSDK--GSITALYTVLVEGD 317
           +TRF +AQREI LA GEPP  +G+PPSVF+ LP+L+ERAGN++   GSITA YTVL EGD
Sbjct: 267 LTRFAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAGNAEAGGGSITAFYTVLSEGD 326

Query: 318 DMTEPIADETRSILDGHIVLSRKLAAANHYPAIDVQASVSRVMNAIVDKEHKAAAQKLRK 377
           D  +PIAD  R +LDGHIVLSR+LA   HYPAID++AS+SRVM A+V  EH   AQ+ ++
Sbjct: 327 DQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVTPEHMIRAQQFKQ 386

Query: 378 VLAKYAEVELLVQIGEYKRGSDKEADEALDRVAAVNAFLRQGLDERSGFDDTLAALRKV 436
           + ++Y +   L+ +G Y  G D++ D A+     +  +LRQGL+++    ++ A L+ +
Sbjct: 387 LWSRYQQSRDLISVGAYVAGGDRDTDLAIALQPQLVTYLRQGLNDKISMGESEAHLQSI 445