Pairwise Alignments

Query, 438 a.a., type III secretion system ATPase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 455 a.a., type III secretion system ATPase SctN from Pectobacterium carotovorum WPP14

 Score =  379 bits (973), Expect = e-109
 Identities = 201/410 (49%), Positives = 273/410 (66%), Gaps = 8/410 (1%)

Query: 20  VEVRGRVEQVVGTIIRAVVPGVKVGELCILRNPWENWTLRAEVVGFVKQVALLTPLGDLQ 79
           VE +GRV  V G ++   +P  ++G+LC +    ++  + AEVVGF      L+ LG L 
Sbjct: 28  VEKKGRVMAVSGILLECSLPQARIGDLCWVARQ-DDSQMMAEVVGFSPDNTFLSALGALD 86

Query: 80  GVSPATEVIPTGEILSIPVGEDLLGRVLDGLGEPMDGG-------PPLKPRTRYPVYAQP 132
           G++    V P  +   I V + LLG VLDG G  ++ G       P        PV    
Sbjct: 87  GIAQGAAVTPLYQPHCIQVSDRLLGSVLDGFGRALEDGGESAFVEPGHATGRTQPVLGDA 146

Query: 133 PNPMQRRIIDRPISLGLRVLDGVLTCGEGQRMGIFAAAGGGKSTLLSSIIKGCSADVCVL 192
           P P  R  I +P+  GLR +DG+LT G+GQR+GIFA AG GK+TLL+ + +    D  V 
Sbjct: 147 PPPTSRPRISQPLPTGLRAVDGLLTIGQGQRVGIFAGAGCGKTTLLAELARNTPCDAIVF 206

Query: 193 ALIGERGREVREFIEHDLGPEGRKKAVLVVSTSDRSSMERLKAAYTATAIAEYFRDQRRS 252
            LIGERGRE+REF++H+L  E R + VLV STSDRSSMER +AA+TATAIAE +R + R 
Sbjct: 207 GLIGERGRELREFLDHELDDELRSRTVLVCSTSDRSSMERARAAFTATAIAEAYRAEGRQ 266

Query: 253 VLLMMDSVTRFGRAQREIGLAAGEPPTRRGFPPSVFSTLPRLMERAGNSDKGSITALYTV 312
           VLL++DS+TRF RAQREIGLA GEP  R G PPSV++ LPRL+ERAG ++ G+ITALY+V
Sbjct: 267 VLLIIDSLTRFARAQREIGLALGEPQGRGGLPPSVYTLLPRLVERAGQTEDGAITALYSV 326

Query: 313 LVEGDDMTEPIADETRSILDGHIVLSRKLAAANHYPAIDVQASVSRVMNAIVDKEHKAAA 372
           L+E D M +P+ADE RS++DGHIVL+R+LA   HYPAIDV AS+SR M+ +VD +H   A
Sbjct: 327 LIEQDSMNDPVADEVRSLIDGHIVLARRLAEQGHYPAIDVLASLSRTMSNVVDTDHTRNA 386

Query: 373 QKLRKVLAKYAEVELLVQIGEYKRGSDKEADEALDRVAAVNAFLRQGLDE 422
             +R+++A Y +VE+L+++GEY+ G D   D A++  A +  FLRQ + E
Sbjct: 387 GGVRRLMAAYKQVEMLIRLGEYQPGHDVLTDSAVNAQAEITQFLRQSMRE 436