Pairwise Alignments

Query, 438 a.a., type III secretion system ATPase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 456 a.a., flagellum-specific ATP synthase FliI from Pectobacterium carotovorum WPP14

 Score =  365 bits (936), Expect = e-105
 Identities = 193/436 (44%), Positives = 284/436 (65%), Gaps = 10/436 (2%)

Query: 11  EEAVHSGPTVEVRGRVEQVVGTIIRAVVPGVKVGELCIL--RNPWENWTLRAEVVGFVKQ 68
           E+ +   P+V   GR+ +  G ++ A    + +G  C++  +N  +   + +EVVGF  Q
Sbjct: 16  EKRIDDTPSVRRYGRLTRATGLVLEATGLHMPLGATCLIERQNGSQVEEIESEVVGFNGQ 75

Query: 69  VALLTPLGDLQGVSPATEVIP------TGEILSIPVGEDLLGRVLDGLGEPMDGGPPLKP 122
              L PL +++G++P   V        + +   +P+G +LLGRVLDG  +P+DG P    
Sbjct: 76  KLFLMPLEEVEGITPGARVYARVGQDSSSQGKQLPLGPELLGRVLDGSAKPLDGLPAPDT 135

Query: 123 RTRYPVYAQPPNPMQRRIIDRPISLGLRVLDGVLTCGEGQRMGIFAAAGGGKSTLLSSII 182
             R P+   P NP+QR  I+  + +G+R ++ +LT G GQRMG+FA +G GKS LL  + 
Sbjct: 136 GYRAPLITPPFNPLQRTPIESVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMA 195

Query: 183 KGCSADVCVLALIGERGREVREFIEHDLGPEGRKKAVLVVSTSDRSSMERLKAAYTATAI 242
           +   ADV V+ LIGERGREV++FIE+ LG EGR ++V++ + +D S + R++ A  AT I
Sbjct: 196 RYTQADVIVVGLIGERGREVKDFIENILGTEGRARSVVIAAPADVSPLLRMQGAAYATRI 255

Query: 243 AEYFRDQRRSVLLMMDSVTRFGRAQREIGLAAGEPPTRRGFPPSVFSTLPRLMERAGNS- 301
           AE FRD+   VLL+MDS+TR+  AQREI LA GEPP  +G+PPSVF+ LP L+ERAGN  
Sbjct: 256 AEDFRDRGHHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGI 315

Query: 302 -DKGSITALYTVLVEGDDMTEPIADETRSILDGHIVLSRKLAAANHYPAIDVQASVSRVM 360
              GS+TA YTVL EGDD  +PIAD  R+ILDGHIVLSR+LA + HYPAID++AS+SR M
Sbjct: 316 HGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQLAESGHYPAIDIEASISRAM 375

Query: 361 NAIVDKEHKAAAQKLRKVLAKYAEVELLVQIGEYKRGSDKEADEALDRVAAVNAFLRQGL 420
            A++D+ H A+ ++ +++L+ Y     LV +G Y  GSD   D+A+     + AFL+QG+
Sbjct: 376 TALIDEGHYASVRQFKQLLSSYQRNRDLVSVGAYAAGSDPMLDKAIRLYPHLEAFLQQGM 435

Query: 421 DERSGFDDTLAALRKV 436
            E+S ++++  AL  +
Sbjct: 436 FEQSNYEESCQALHTI 451