Pairwise Alignments

Query, 438 a.a., type III secretion system ATPase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 450 a.a., flagellum-specific ATP synthase FliI from Magnetospirillum magneticum AMB-1

 Score =  345 bits (885), Expect = 2e-99
 Identities = 199/425 (46%), Positives = 267/425 (62%), Gaps = 11/425 (2%)

Query: 20  VEVRGRVEQVVGTIIRA--VVPGVKVGELC--ILRNPWENWTLRAEVVGFVKQVALLTPL 75
           ++V G++  V G ++ A  V   + VG+ C  + R   +   +  EVVGF +  ALL P 
Sbjct: 18  IQVYGQIAAVQGMLLEAGGVQRTISVGDRCNVVAR---DGRRVICEVVGFRQGRALLMPY 74

Query: 76  GDLQGVSPATEV-IPTGEILSIPVGEDLLGRVLDGLGEPMDG-GPPLKPRTRYPVYAQPP 133
             ++G+       +   E +  P     LGRV++G GEP+DG GP     T YPV AQPP
Sbjct: 75  SPIEGIGLGCRTEVQDAEPVVFP-DRGWLGRVINGFGEPVDGLGPLPGGDTAYPVKAQPP 133

Query: 134 NPMQRRIIDRPISLGLRVLDGVLTCGEGQRMGIFAAAGGGKSTLLSSIIKGCSADVCVLA 193
           +   R  +   I LGLR ++  LTC  GQRMGIFA +G GKS+L+S + +  SAD+ VL 
Sbjct: 134 SAHSRSRVSGKIDLGLRSVNAFLTCCRGQRMGIFAGSGVGKSSLMSMMARNTSADISVLG 193

Query: 194 LIGERGREVREFIEHDLGPEGRKKAVLVVSTSDRSSMERLKAAYTATAIAEYFRDQRRSV 253
           LIGERGRE REFIE DLGPEG K++V+VVSTSD S + R +AAY    +AE+FRDQ   V
Sbjct: 194 LIGERGREAREFIEDDLGPEGMKRSVVVVSTSDESPLMRRQAAYMTLTVAEFFRDQGLDV 253

Query: 254 LLMMDSVTRFGRAQREIGLAAGEPPTRRGFPPSVFSTLPRLMERAG-NSDKGSITALYTV 312
           L MMDSVTRF  AQREI L+AGEPP  +G+ P+VF+ LPRL+ERAG    KGSIT L+TV
Sbjct: 254 LCMMDSVTRFAMAQREISLSAGEPPASKGYTPTVFAELPRLLERAGPGVGKGSITGLFTV 313

Query: 313 LVEGDDMTEPIADETRSILDGHIVLSRKLAAANHYPAIDVQASVSRVMNAIVDKEHKAAA 372
           LV+ DD  EPIAD  R ILDGHIVL R +A    YPAI++  SVSR M    +++     
Sbjct: 314 LVDADDHNEPIADAVRGILDGHIVLDRSIAERGRYPAINILRSVSRTMPGCNNQQENDLV 373

Query: 373 QKLRKVLAKYAEVELLVQIGEYKRGSDKEADEALDRVAAVNAFLRQGLDERSGFDDTLAA 432
           ++ R +L+ Y ++  L+++G Y+RG+D + DEA+    A+ AFL Q   E +      A 
Sbjct: 374 RRARSLLSTYEDMAELIRLGAYRRGTDPKVDEAIHYYPAIEAFLGQLKTEATTLQTCYAQ 433

Query: 433 LRKVV 437
           L +V+
Sbjct: 434 LAEVL 438