Pairwise Alignments

Query, 438 a.a., type III secretion system ATPase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 456 a.a., Flagellum-specific ATP synthase FliI from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  357 bits (916), Expect = e-103
 Identities = 196/427 (45%), Positives = 278/427 (65%), Gaps = 11/427 (2%)

Query: 18  PTVEVRGRVEQVVGTIIRAVVPGVKVGELCIL--RNPWENWTLRAEVVGFVKQVALLTPL 75
           P V   GR+ +  G ++ A    + +G  CI+  ++  E   + +EVVGF  Q   L PL
Sbjct: 23  PAVRRYGRLTRATGLVLEATGLQLPLGATCIIERQDGPETKEVESEVVGFNGQRLFLMPL 82

Query: 76  GDLQGVSPATEVIPT---GEILS----IPVGEDLLGRVLDGLGEPMDGGPPLKPRTRYPV 128
            +++G+ P   V      G+ L     +P+G  LLGRVLDG G+P+DG P         +
Sbjct: 83  EEVEGILPGARVYARNGHGDGLQSGKQLPLGPALLGRVLDGGGKPLDGLPAPDTLETGAL 142

Query: 129 YAQPPNPMQRRIIDRPISLGLRVLDGVLTCGEGQRMGIFAAAGGGKSTLLSSIIKGCSAD 188
              P NP+QR  I+  +  G+R ++ +LT G GQRMG+FA +G GKS LL  + +   AD
Sbjct: 143 ITPPFNPLQRTPIEHVLDTGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRAD 202

Query: 189 VCVLALIGERGREVREFIEHDLGPEGRKKAVLVVSTSDRSSMERLKAAYTATAIAEYFRD 248
           V V+ LIGERGREV++FIE+ LGP+GR ++V++ + +D S + R++ A  AT IAE FRD
Sbjct: 203 VIVVGLIGERGREVKDFIENILGPDGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRD 262

Query: 249 QRRSVLLMMDSVTRFGRAQREIGLAAGEPPTRRGFPPSVFSTLPRLMERAGNS--DKGSI 306
           + + VLL+MDS+TR+  AQREI LA GEPP  +G+PPSVF+ LP L+ERAGN     GSI
Sbjct: 263 RGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGIHGGGSI 322

Query: 307 TALYTVLVEGDDMTEPIADETRSILDGHIVLSRKLAAANHYPAIDVQASVSRVMNAIVDK 366
           TA YTVL EGDD  +PIAD  R+ILDGHIVLSR+LA A HYPAID++AS+SR M A++ +
Sbjct: 323 TAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALITE 382

Query: 367 EHKAAAQKLRKVLAKYAEVELLVQIGEYKRGSDKEADEALDRVAAVNAFLRQGLDERSGF 426
           +H A  +  +++L+ +     LV +G Y +GSD   D+A+     + AFL+QG+ ER+ +
Sbjct: 383 QHYARVRLFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAITLWPQLEAFLQQGIFERADW 442

Query: 427 DDTLAAL 433
           +D+L AL
Sbjct: 443 EDSLQAL 449