Pairwise Alignments

Query, 438 a.a., type III secretion system ATPase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 433 a.a., Type III secretion cytoplasmic ATP synthase (EC 3.6.3.14, YscN,SpaL,MxiB,HrcN,EscN) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  390 bits (1003), Expect = e-113
 Identities = 214/415 (51%), Positives = 277/415 (66%), Gaps = 7/415 (1%)

Query: 24  GRVEQVVGTIIRAVVPGVKVGELCILRNPWENWTLRAEVVGFVKQVALLTPLGDLQGVSP 83
           GR++ V  T++ A +PGV +GELC ++ P E     AEVVG     ALL+P     G+  
Sbjct: 23  GRIQDVSATLLNAWLPGVFMGELCCIK-PGEEL---AEVVGINGSKALLSPFTSTIGLHC 78

Query: 84  ATEVIPTGEILSIPVGEDLLGRVLDGLGEPMDGGPPLKPRTRYPVY-AQPPNPMQRRIID 142
             +V+       +PVGE LLGRV+DG G P+DG     P   +  Y A PP  M R+ I 
Sbjct: 79  GQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGRE--LPDVCWKDYDAMPPPAMVRQPIT 136

Query: 143 RPISLGLRVLDGVLTCGEGQRMGIFAAAGGGKSTLLSSIIKGCSADVCVLALIGERGREV 202
           +P+  G+R +D V TCGEGQR+GIF+A G GKSTLL+ +     AD  VL LIGERGREV
Sbjct: 137 QPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREV 196

Query: 203 REFIEHDLGPEGRKKAVLVVSTSDRSSMERLKAAYTATAIAEYFRDQRRSVLLMMDSVTR 262
           REFI+  L  E RK+ V+VV+TSDR ++ER++A + AT IAE+FRD  + V+L+ DS+TR
Sbjct: 197 REFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTR 256

Query: 263 FGRAQREIGLAAGEPPTRRGFPPSVFSTLPRLMERAGNSDKGSITALYTVLVEGDDMTEP 322
           + RA REI LAAGE      +PP VFS LPRL+ER G  +KGSITA YTVLVEGDDM EP
Sbjct: 257 YARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEKGSITAFYTVLVEGDDMNEP 316

Query: 323 IADETRSILDGHIVLSRKLAAANHYPAIDVQASVSRVMNAIVDKEHKAAAQKLRKVLAKY 382
           +ADE RS+LDGHIVLSR+LA   HYPAIDV A++SRV   +   EH+  A  LR+ LA Y
Sbjct: 317 LADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRCLALY 376

Query: 383 AEVELLVQIGEYKRGSDKEADEALDRVAAVNAFLRQGLDERSGFDDTLAALRKVV 437
            EVELL++IGEY+RG D + D+A+D    +  FLRQ  DE  G +  +  L +++
Sbjct: 377 QEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIEKLHQIL 431