Pairwise Alignments

Query, 277 a.a., type III secretion apparatus lipoprotein, YscJ/HrcJ family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 244 a.a., EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein from Escherichia coli ECRC99

 Score = 97.4 bits (241), Expect = 3e-25
 Identities = 61/193 (31%), Positives = 105/193 (54%), Gaps = 3/193 (1%)

Query: 15  LRNAALAVFLLMLLTGCKA-ELYKGLNEEQANTMLATLLRHGVPAEKLAAGKEGYALSVE 73
           ++  +L +F+L LL GCK  EL   L+++QAN +LA L RH + AEK   GK G+++ VE
Sbjct: 1   MKYISLLLFIL-LLCGCKQQELLNHLDQQQANDVLAVLQRHNINAEKKDQGKTGFSIYVE 59

Query: 74  RDQIVRALEILRENSLPREQYQNLGKVFSGDGMIASPSEEKARLAYAISQELSDTFSRID 133
                 A++ L+  +LP +    + ++F  D +++SP  EKARL  AI Q L  +   +D
Sbjct: 60  PTDFASAVDWLKIYNLPGKPDIQISQMFPADALVSSPRAEKARLYSAIEQRLEQSLKIMD 119

Query: 134 GVLTARVHVVL-ASSETASETRVPASAAVFLRHGPESPVVNLIPKIRELAAKAVPGLDYE 192
           G++++RVHV     +  + +T +P   +V   +  +      I  I+     +   + YE
Sbjct: 120 GIVSSRVHVSYDVDTGDSGKTALPIHISVLAVYEKDINPEIKINDIKRFIVNSFASVQYE 179

Query: 193 RVSVMLVPVRETV 205
            +SV+L   R+ +
Sbjct: 180 NISVVLSKRRDII 192