Pairwise Alignments

Query, 277 a.a., type III secretion apparatus lipoprotein, YscJ/HrcJ family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 190 a.a., type III secretion system LEE inner membrane ring protein EscJ from Escherichia coli ECRC98

 Score = 99.4 bits (246), Expect = 5e-26
 Identities = 56/174 (32%), Positives = 95/174 (54%), Gaps = 5/174 (2%)

Query: 25  LMLLTGCKAELYKGLNEEQANTMLATLLRHGVPAEKLAAGKEGYALSVERDQIVRALEIL 84
           + L   CK +LY GL E++AN M A LL + V   K         LSVE++  VRA+ IL
Sbjct: 14  ICLTVACKEQLYTGLTEKEANQMQALLLSNDVNVSKEMDKSGNMTLSVEKEDFVRAITIL 73

Query: 85  RENSLPREQYQNLGKVFSGDGMIASPSEEKARLAYAISQELSDTFSRIDGVLTARVHVVL 144
             N  P++++ ++  +F    ++ASPS+E A++ Y   Q++    S+I GV+   V + +
Sbjct: 74  NNNGFPKKKFADIEVIFPPSQLVASPSQENAKINYLKEQDIERLLSKIPGVIDCSVSLNV 133

Query: 145 ASSETASETRVPASAAVFLRHGPESPVVNLIPKIRELAAKAVPGLDYERVSVML 198
            ++E+      P+SAAV +   PE  +   + +I+ L   +V  L  E +SV++
Sbjct: 134 NNNESQ-----PSSAAVLVISSPEVNLAPSVIQIKNLVKNSVDDLKLENISVVI 182