Pairwise Alignments

Query, 277 a.a., type III secretion apparatus lipoprotein, YscJ/HrcJ family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 260 a.a., type III secretion inner membrane ring lipoprotein SctJ from Dickeya dianthicola 67-19

 Score =  133 bits (334), Expect = 5e-36
 Identities = 73/172 (42%), Positives = 109/172 (63%), Gaps = 3/172 (1%)

Query: 20  LAVFLLMLLTGC--KAELYKGLNEEQANTMLATLLRHGVPAEKLAAGKEGYALSVERDQI 77
           L + L +L+ GC  + EL++GL+E  AN ++A L  + + AEK    K G ++ ++   +
Sbjct: 10  LTLLLALLIAGCGDRVELHRGLSENDANEVIAALGGYHIGAEKRTE-KTGVSILIDVKDM 68

Query: 78  VRALEILRENSLPREQYQNLGKVFSGDGMIASPSEEKARLAYAISQELSDTFSRIDGVLT 137
            RA+ IL    LPR+   NLG+VF   G+I++P EE+AR  YA+SQE+  T ++IDGVL 
Sbjct: 69  ERAVNILNAAGLPRQARTNLGQVFQKTGVISTPLEERARYIYALSQEVESTLTQIDGVLV 128

Query: 138 ARVHVVLASSETASETRVPASAAVFLRHGPESPVVNLIPKIRELAAKAVPGL 189
           ARVHVVL       E   PASAAVF+++ PE    ++ P+IR + A ++PGL
Sbjct: 129 ARVHVVLPERIAPGEPIQPASAAVFIKYRPELEPDSIEPRIRRMVASSIPGL 180