Pairwise Alignments

Query, 277 a.a., type III secretion apparatus lipoprotein, YscJ/HrcJ family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 260 a.a., type III secretion inner membrane ring lipoprotein SctJ from Dickeya dadantii 3937

 Score =  135 bits (341), Expect = 7e-37
 Identities = 93/258 (36%), Positives = 142/258 (55%), Gaps = 19/258 (7%)

Query: 20  LAVFLLMLLTGC--KAELYKGLNEEQANTMLATLLRHGVPAEKLAAGKEGYALSVERDQI 77
           L + L ML+ GC  + EL++GL+E  AN ++A L  + + AEK    K G ++ ++   +
Sbjct: 10  LTLLLAMLIVGCGDRVELHRGLSENDANEVIAALGGYHIGAEKRTE-KTGVSILIDVKDM 68

Query: 78  VRALEILRENSLPREQYQNLGKVFSGDGMIASPSEEKARLAYAISQELSDTFSRIDGVLT 137
            RA+ IL    LPR+   NLG+VF   G+I++P EE+AR  YA+SQE+  T ++IDGVL 
Sbjct: 69  ERAVNILNAAGLPRQARTNLGQVFQKTGVISTPLEERARYIYALSQEVESTLTQIDGVLV 128

Query: 138 ARVHVVLASSETASETRVPASAAVFLRHGPESPVVNLIPKIRELAAKAVPGL---DYERV 194
           ARVHVVL       E   PASAAVF+++ PE    ++ P+IR + A ++PGL     + +
Sbjct: 129 ARVHVVLPERIAPGEPIQPASAAVFIKYRPELEPDSIEPRIRRMVASSIPGLAGKSDKDL 188

Query: 195 SVMLVPVRETVTVPMQQGATLFGMPLPSESGPSYLLVAAGVTLLAALAGLAFAGARTGLI 254
           +++ VP            A  +   +P+ S   + L    +T L  LAGL  A A  G++
Sbjct: 189 AIVFVP------------AEPYKDHIPTVSLGPFQLTPQTMTQLQWLAGL-LALALAGVL 235

Query: 255 AFGARRSASGDARAARGP 272
            +   +      RA R P
Sbjct: 236 GWRFGKPWWEQQRARRKP 253