Pairwise Alignments

Query, 1000 a.a., diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 1247 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  182 bits (463), Expect = 1e-49
 Identities = 179/707 (25%), Positives = 301/707 (42%), Gaps = 54/707 (7%)

Query: 288 LFEDVTAEVRAQEALTRSEERLKLALDAASEAHWDWNF-ETGELYCSPRYYEMLGYVPGE 346
           L  ++   V  ++ L  SE   +  +++ S   W+ +  +    Y SP   E+LGY P  
Sbjct: 292 LSSEIARRVALEQELRSSEYHYRGLVESLSAIAWEASVADFTYSYVSPHAEELLGY-PRA 350

Query: 347 FECTHDALRDLMHPDDLCEVTTALCMPDPAVSHAVEACGVGQFEVQFRLRAKGGDWKWML 406
                   R+++HP DL     A C  +   +            + +R+    G   W+ 
Sbjct: 351 HWLIPGFWRNIIHPADLTRAE-AYCYRETRANR--------DHSIDYRVITADGRCLWVR 401

Query: 407 ARGRVLARREDGSPARVVGTHMDITAAVSQRLALGRSEELFRGIFSTASVGIVLLDRFGL 466
               +++  E G    + G  +DI+ A     AL  SE+ F  +F      +V+      
Sbjct: 402 D---IVSLIEHGHEPVLRGLMIDISEAKRTEEALQLSEQKFASVFQQCPDMLVI------ 452

Query: 467 LVRVNDACARMLGYATDEMRGQHFSRFMHDDETTLAATTLTS----LLDRTQSTS--RLQ 520
             R++D C   +  A ++  G      +    T L    +      LL R Q+TS   L+
Sbjct: 453 -ARLSDGCLLEVNKAFEDQIGLKAEHVVGKTATELNIWGIQGVGPDLLQRVQTTSIRNLE 511

Query: 521 HRLRGKDGSYLWTDISASPLEGPNGEVEAALAIIVDINEQRTAQQAQEDSERRYRALFEN 580
                 +G      ISA P +     +EA + ++ DI + +  QQ  + SE ++   F  
Sbjct: 512 MPFLRSNGQAFTGLISAEPFQLDT--IEAIVVVVRDITQLKETQQQLQTSEEKFAKAFHA 569

Query: 581 AQVGIFRTRISDGRFMEANSRIIEMYGWPDRAEFMEKMRSTEWYVDSEARGRMVGTLLRR 640
           +  G+  +R  DG  +E N     + G+       +       +VD   R  M+  + R 
Sbjct: 570 SPDGLLLSRQRDGLLIEVNDGFSRITGFTSATSLDQSTLDLGIWVDLNERKHMLELMQRD 629

Query: 641 GEFRNIEVEMRRRDGSTVWFEYSGKL----DGDTIIGVAQDVTQRRAAEAARQRSEAHYR 696
           G  R+    +RR DG     E S +     D D ++ +A+D+T+R+  +   Q++     
Sbjct: 630 GFVRDFICHIRRSDGQIRLCELSSRPLPIGDDDCMLTIARDITERQLMQEKLQQAAT--- 686

Query: 697 LLFEAAADAIFLHDPEGKFLDVNEVACRRLGYTRRELLAMTPREL-----DAEEFAEQVG 751
            +FE+ A+ + + D       VN       GY+  E L  TPR L     D+  +A    
Sbjct: 687 -VFESTAEGVLITDTRQNISAVNRAFSEITGYSEAEALGNTPRLLASGLHDSAFYAAMW- 744

Query: 752 ERIRRLREEGSLTFESAHRTRNGTVLPVEIHAKLLDFDGKPVV--LSIARDITDRKRLEQ 809
               +L  +G    E ++R +NG + P  +    +    + +   +++  DI+  K  + 
Sbjct: 745 ---HQLTAQGHWQGEISNRRKNGELYPSWLTISAVRNREQLITHFVAVFADISSLKLAQA 801

Query: 810 ALMREATTDPLTGIRNRRQFFVDAEREMGRAVRYGRPLAVLMLDLDRFKRVNDRFGHHAG 869
            L  +A  DPLTG+ NR  F    +  +      G+  AVL LDLDRFK +ND  GH  G
Sbjct: 802 RLDYQAHHDPLTGLPNRTLFESRLQAALNGHQETGQQGAVLFLDLDRFKHINDSLGHPIG 861

Query: 870 DAVLMGCVQACQQALRETDILGRLGGEEFAAVLLETDLDDALAAAERLRRAVEEMDVPFS 929
           D +L       ++ LR+ D + RLGG+EF  ++L   L  A  A     + +     PF 
Sbjct: 862 DLLLKDIAVRLKEQLRDIDTVARLGGDEF--IILLPGLQHASDAQYLANKLLACFTPPFQ 919

Query: 930 G--QRLRCTVSIGLALRGPGDGA-LDDILRRADSALYAAKEAGRNRV 973
                   + SIG +L  P DG  +  +++ AD+A+Y +K  GRNRV
Sbjct: 920 AGEHEFFISASIGTSLY-PEDGTDVATLVKNADAAMYRSKAKGRNRV 965