Pairwise Alignments

Query, 1000 a.a., diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 1247 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  182 bits (462), Expect = 1e-49
 Identities = 179/701 (25%), Positives = 309/701 (44%), Gaps = 42/701 (5%)

Query: 288 LFEDVTAEVRAQEALTRSEERLKLALDAASEAHWDWNFETGEL-YCSPRYYEMLGYVPGE 346
           L  +++  +  ++ L  SE   +  +++ S   W+ +       Y SP   ++LGY   +
Sbjct: 292 LSSEISRRIALEQELRSSEYHYRGLVESLSAIAWEADANDFTYSYVSPHAEDLLGYPLSD 351

Query: 347 FECTHDALRDLMHPDDLCEVTTALCMPDPAVSHAVEACGVGQFEVQFRLRAKGGDWKWML 406
           +       R ++HP+D      A C  + A              + +R+    G   W+ 
Sbjct: 352 W-LRPGFWRSILHPEDALWAQ-AYCDSETAAGR--------DHSLDYRVIRADGQPLWVR 401

Query: 407 ARGRVLARREDGSPARVVGTHMDITAAVSQRLALGRSEELFRGIFSTASVGIVLLDRF-- 464
               +++  E G    + G  +DI+       AL  SE+ F  +F      I+L+ R   
Sbjct: 402 ---NIVSMIEHGHQPVMRGLMIDISETKRTEDALRLSEQKFASVFQQCP-DILLIARHSD 457

Query: 465 GLLVRVNDACARMLGYATDEMRGQHFSRFMHDDETTLAATTLTSLLDRTQSTS--RLQHR 522
           G L+ VN+A    +G   D++ G    R   D +      +   LL+R        L+  
Sbjct: 458 GCLLEVNEAFEEQIGLPPDQVIG----RTATDLDLWGVEGSGPLLLERLHQGGIRNLEMS 513

Query: 523 LRGKDGSYLWTDISASPLEGPNGEVEAALAIIVDINEQRTAQQAQEDSERRYRALFENAQ 582
            R  +G  L+T ++++     +G   A +  + DI++ +  QQ  + SE ++   F  + 
Sbjct: 514 FRRSNGQ-LFTGLTSAETFELDG-TPALVVAVRDISQLKETQQQLQTSEEKFAKAFHASP 571

Query: 583 VGIFRTRISDGRFMEANSRIIEMYGWPDRAEFMEKMRSTEWYVDSEARGRMVGTLLRRGE 642
            G+  +R SDG  +E N     + G+       +       +VD   R R+V  L R G 
Sbjct: 572 DGLLLSRQSDGLLLEVNEGFCRLTGYDLNPTIDQTSLDLGIWVDLNERKRLVDQLNRDGF 631

Query: 643 FRNIEVEMRRRDGSTVWFEYSGK---LDG-DTIIGVAQDVTQRRAAEAARQRSEAHYRLL 698
            R+    +RR DG     E S +   + G D ++ +A+D+T+R   +   Q +      +
Sbjct: 632 VRDFTCHIRRSDGQIRLCELSARPLPITGVDCMLTIARDITERHLMQEKLQLAAT----V 687

Query: 699 FEAAADAIFLHDPEGKFLDVNEVACRRLGYTRRELLAMTPRELDAEEFAEQVGERI-RRL 757
           FE  A+ + + D + +   VN       GY+  E L  TPR L + +        +  +L
Sbjct: 688 FENTAEGVLITDIDQRISAVNRAFSEITGYSEIEALGQTPRLLASGQHDSAFYLAMWHQL 747

Query: 758 REEGSLTFESAHRTRNGTVLPVEIHAKLLDFDGKPVV--LSIARDITDRKRLEQALMREA 815
             EG    E  ++ +NG + P  +    +    + +   +++  DI+  K  +  L  +A
Sbjct: 748 TAEGHWQGEIYNKRKNGELYPSWLTISAVRNSDREITHFVAVFADISSIKHAQAKLDYQA 807

Query: 816 TTDPLTGIRNRRQFFVDAEREMGRAVRYGRPLAVLMLDLDRFKRVNDRFGHHAGDAVLMG 875
             DPLTG+ NR  F    +  +  A    R  AVL LDLDRFK +ND  GH  GD +L G
Sbjct: 808 HHDPLTGLPNRTLFENRLQGVLTCAQVSNRQGAVLFLDLDRFKHINDSLGHPVGDLLLKG 867

Query: 876 CVQACQQALRETDILGRLGGEEFAAVLLETDLDDALAAAERLRRAVEEMDVPFSG--QRL 933
             Q  ++ +R+ D + RLGG+EF  ++L   L     A+    + +   + PF       
Sbjct: 868 IAQRLKEQVRDVDTVARLGGDEF--IILLPGLHKPSDASTIANKLLACFNAPFQAGEHEF 925

Query: 934 RCTVSIGLALRGPGDGA-LDDILRRADSALYAAKEAGRNRV 973
             + SIG++L  P DG  +  ++R AD+A+Y +K  GRNRV
Sbjct: 926 FTSASIGISLY-PQDGTDVSTLIRNADAAMYRSKAKGRNRV 965