Pairwise Alignments

Query, 1000 a.a., diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 698 a.a., diguanylate cyclase with PAS/PAC sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  185 bits (470), Expect = 8e-51
 Identities = 131/338 (38%), Positives = 170/338 (50%), Gaps = 29/338 (8%)

Query: 678 VTQRRAAEAARQRSEAHYRLLFEAAADAIFLHDPEGKFLDVNEVACRRLGYT----RREL 733
           VT RR AEAA + +E  +R L E A   IF    +G    +N+     LG+      R +
Sbjct: 371 VTARRDAEAALRDAERQHRELVENAPIGIFRTAWDGTINVLNQHGAALLGFRDVAHARAV 430

Query: 734 LAMTPRELDAEEFAEQV------------GERIRRLREEGSLTFESAHRTRNGTVLPVEI 781
           L  +   L AE    Q             G R+R  R  G   + S +  R GT    E+
Sbjct: 431 LDDSVIPLYAEPMDRQAMLDDLTAGEVVTGLRLRWYRRGGEAIWVSLYARRTGTPEAPEV 490

Query: 782 HAKLLDFDGKPVVLSIARDITDRKRLEQALMREATTDPLTGIRNRRQFFVDAEREMGRAV 841
            +  LD         +   + D  RLEQ     ATTD LTG+ NRR F    E E  RA 
Sbjct: 491 ESFFLD---------VTDQVEDTLRLEQL----ATTDELTGVANRRHFMARLEDEAARAQ 537

Query: 842 RYGRPLAVLMLDLDRFKRVNDRFGHHAGDAVLMGCVQACQQALRETDILGRLGGEEFAAV 901
           RYGRPL+VL+LD D FK +ND +GH AGD VL         +LRE D++GRLGGEEF  +
Sbjct: 538 RYGRPLSVLLLDADHFKSINDTWGHEAGDMVLRHITDVMGLSLRENDLIGRLGGEEFGVL 597

Query: 902 LLETDLDDALAAAERLRRAVEEMDVPFSGQRLRCTVSIGLALRGPGDGALDDILRRADSA 961
           L ET  + AL  AER+R AVE+  V      + CTVS+G A     + +LDD++RRAD  
Sbjct: 598 LPETAQERALRTAERIRAAVEDAPVAVRDVWVGCTVSVGAAEYRGANDSLDDLIRRADHM 657

Query: 962 LYAAKEAGRNRVMLARAVNSGAEDQNRRWSSGGVLRGE 999
           L  AKE GRNRV   +A  + AE  +    +G    G+
Sbjct: 658 LMRAKEEGRNRVCAQQARPACAESPDGTGGNGPAGSGQ 695



 Score = 43.1 bits (100), Expect = 7e-08
 Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 3/114 (2%)

Query: 557 INEQRTAQQAQEDSERRYRALFENAQVGIFRTRISDGRFMEANSRIIEMYGWPDRAEFME 616
           +  +R A+ A  D+ER++R L ENA +GIFRT   DG     N     + G+ D A    
Sbjct: 371 VTARRDAEAALRDAERQHRELVENAPIGIFRT-AWDGTINVLNQHGAALLGFRDVAHARA 429

Query: 617 KMRST--EWYVDSEARGRMVGTLLRRGEFRNIEVEMRRRDGSTVWFEYSGKLDG 668
            +  +    Y +   R  M+  L        + +   RR G  +W     +  G
Sbjct: 430 VLDDSVIPLYAEPMDRQAMLDDLTAGEVVTGLRLRWYRRGGEAIWVSLYARRTG 483