Pairwise Alignments

Query, 1000 a.a., diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 578 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  209 bits (531), Expect = 6e-58
 Identities = 174/547 (31%), Positives = 252/547 (46%), Gaps = 50/547 (9%)

Query: 465 GLLVRVNDACARMLGYAT-DEMRGQHFSRFMHDDETTLAATTLTSLLDRTQ-STSRLQHR 522
           G++   N A   MLG  + D++ G+ F   +  D     A  +  LL   +   S    +
Sbjct: 41  GVVADANSAGIAMLGAGSADQVVGRAFRDLVGGDY----AGVIDDLLHLKEIEDSAFPIK 96

Query: 523 LRGKDGSYLWTDISASPLEGPNGEVEAALAIIV--DINEQRTAQQAQEDSERRYRALFEN 580
           +R  DG     ++   P      E+  A A++   DI+ Q    +   DSE R++AL E 
Sbjct: 97  VRHLDGGTFEAELQIHPAR----ELGPAHAVVTARDISHQGRLARTARDSEDRFQALVER 152

Query: 581 AQVGIFRTRISDGRFMEANSRIIEMYGWPDRAEFMEKMRSTEWYVD-SEARGRMVGTLLR 639
           +   +       GR    N+  + + G  D ++F     S  +  D  E     +G LL 
Sbjct: 153 SMHLVLLCH--GGRIGYINATGVAVLGGTDPSQFAGIPVSEIFAGDYREIVAADLGALLD 210

Query: 640 RGEFRNIEVEMRRRDGSTVWFEY---------------------SGKLDGDTIIGVAQDV 678
            G    + + + R DGST   +                      +G++     +    D 
Sbjct: 211 EGGI--MPMRLARLDGSTFDAQIKATKLPSQGAAPEYMVEARDITGQIRAVAALRHMNDT 268

Query: 679 TQRRAAEAARQRSEAHYRL---------LFEAAADAIFLHDPEGKFLDVNEVACRRLGYT 729
            +++ A   R+  E   R          L EA  + ++  D  G++L  N       G  
Sbjct: 269 LEQQVAARTRELDEERARAVEARAFVESLLEAVPNPLWWKDTRGRYLGYNGAFRELHGVG 328

Query: 730 RRELLAMTPRELDAEEFAEQVGER-IRRLREEGSLTFESAHRTRNGTVLPVEIHAKLLDF 788
             + +  T  E+    FA    +   + L E G + FE+         L V ++  +   
Sbjct: 329 PTDWIGRTTAEMVNPGFAAIASQADTQALAEAGRVQFEAHLEVAADRALDVVVNKTVWHG 388

Query: 789 -DGKPV-VLSIARDITDRKRLEQALMREATTDPLTGIRNRRQFFVDAEREMGRAVRYGRP 846
            D +P  V+ +  DIT+RKR+E  L R ATTD LTGI NRR F   A  E+ RA R+GRP
Sbjct: 389 RDNRPEGVIGVMLDITERKRMEAELRRLATTDVLTGIFNRRHFMEMARIEVDRARRHGRP 448

Query: 847 LAVLMLDLDRFKRVNDRFGHHAGDAVLMGCVQACQQALRETDILGRLGGEEFAAVLLETD 906
           L  LMLD+D FKR+ND  GH  GD  +      C Q +R  D+LGR+GGEEFA VL ETD
Sbjct: 449 LVALMLDIDHFKRINDTHGHPVGDVAIKALADVCTQIIRHEDVLGRMGGEEFAIVLTETD 508

Query: 907 LDDALAAAERLRRAVEEMDVPFSGQRLRCTVSIGLALRGPGDGALDDILRRADSALYAAK 966
           LD AL  AERLR+AV  + +P     +  T SIG+A R  GD  +D IL RAD ALY+AK
Sbjct: 509 LDGALLVAERLRQAVAAIRIPAELGTVAFTTSIGVAERLEGDATIDTILSRADMALYSAK 568

Query: 967 EAGRNRV 973
            +GRN+V
Sbjct: 569 RSGRNKV 575



 Score = 43.5 bits (101), Expect = 4e-08
 Identities = 81/311 (26%), Positives = 123/311 (39%), Gaps = 48/311 (15%)

Query: 420 PARVVG-THMDITAA-VSQRLALGR----SEELFRGIFSTASVGIVLLDRFGLLVRVNDA 473
           PAR +G  H  +TA  +S +  L R    SE+ F+ +    S+ +VLL   G +  +N  
Sbjct: 113 PARELGPAHAVVTARDISHQGRLARTARDSEDRFQALVER-SMHLVLLCHGGRIGYINAT 171

Query: 474 CARMLGYATD--EMRGQHFSRFMHDDETTLAATTLTSLLDRTQSTSRLQHRLRGKDGSYL 531
              +LG  TD  +  G   S     D   + A  L +LLD       +  RL   DGS  
Sbjct: 172 GVAVLG-GTDPSQFAGIPVSEIFAGDYREIVAADLGALLDEG---GIMPMRLARLDGSTF 227

Query: 532 WTDISASPLEGPNGEVE---------------AALAIIVDINEQRTAQQAQEDSERRYRA 576
              I A+ L       E               AAL  + D  EQ+ A + +E  E R RA
Sbjct: 228 DAQIKATKLPSQGAAPEYMVEARDITGQIRAVAALRHMNDTLEQQVAARTRELDEERARA 287

Query: 577 LFENAQVGIFRTRISD--------GRFMEANSRIIEMYG-----WPDRAEFMEKMRSTEW 623
           +   A V      + +        GR++  N    E++G     W  R    E +     
Sbjct: 288 VEARAFVESLLEAVPNPLWWKDTRGRYLGYNGAFRELHGVGPTDWIGRTT-AEMVNPGFA 346

Query: 624 YVDSEARGRMVGTLLRRGEFRNIEVEMRRR----DGSTVWFEYSGKLDGDTIIGVAQDVT 679
            + S+A  + +    R     ++EV   R        TVW     + +G  +IGV  D+T
Sbjct: 347 AIASQADTQALAEAGRVQFEAHLEVAADRALDVVVNKTVWHGRDNRPEG--VIGVMLDIT 404

Query: 680 QRRAAEAARQR 690
           +R+  EA  +R
Sbjct: 405 ERKRMEAELRR 415