Pairwise Alignments

Query, 1000 a.a., diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 703 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  176 bits (446), Expect = 5e-48
 Identities = 135/420 (32%), Positives = 203/420 (48%), Gaps = 27/420 (6%)

Query: 568 EDSERRYRALFENAQVGIFRTRISDGRFMEANSRIIEMYGWPDRAEFMEKMRSTE--WYV 625
           +D    YR+LFENA  GI+RT   DGR+++AN  +  +YG+ D AE +  +       YV
Sbjct: 17  DDDLGGYRSLFENAVEGIYRTT-PDGRYLDANPALARIYGYKDPAELIAGLTDIARGLYV 75

Query: 626 DSEARGRMVGTLLRRGEFRNIEVEMRRRDGSTVWFEYSGKL--DG-DTII---GVAQDVT 679
           D   R R    L R    RN E  +R R G  +W   + +   DG D ++   G  Q++T
Sbjct: 76  DPADRERFREILARDSVVRNFEARVRTRSGEIIWIAENARAVYDGRDRLVCYEGTVQNIT 135

Query: 680 QRRAAEAARQRSEAHYRLLFEAAADAIFLHDPEGKFLDVNEVACRRLGYTRRELLAMTPR 739
            R+ AE + + +      +FE   +AI + D E + L VN    R  G+   E++  T  
Sbjct: 136 ARKQAEESLRLAAT----VFETVGEAIVVTDRERRILAVNAAFERMTGWNAAEMVGQTCD 191

Query: 740 ELDAEEFA-EQVGERIRRLREEGSLTFESAHRTRNGTVLPVEIHAKLLDF-------DGK 791
            L  E     ++ E  R     G  + E+  R +     P  +    +D        DG+
Sbjct: 192 LLAVEMIGLREIEEMWRLAANTGQWSGETWTRRKESEPFPAALALTAVDQGADAKGEDGR 251

Query: 792 PVVLSIARDITDRKRLEQALMREATTDPLTGIRNRRQFFVDAEREMGRAVRYGRPLAVLM 851
            V+L   RDIT ++R EQ +   A+ D LT + NR          + RA + G  LAVL 
Sbjct: 252 FVLL--LRDITRKRRDEQRIRFHASHDALTRLPNRHTVMEALGEAIVRAEQTGERLAVLY 309

Query: 852 LDLDRFKRVNDRFGHHAGDAVLMGCVQACQQALRETDILGRLGGEEFAAVLLETDLDDAL 911
           LD++RFK +ND +GH  GD +L    +  +  +R +D++GRLGG+EF  V+L   + D  
Sbjct: 310 LDVNRFKDINDSYGHAVGDELLRQVARRLKACVRASDVIGRLGGDEF--VMLLPSVGDHT 367

Query: 912 AAAERLRRAVEEMDVPF--SGQRLRCTVSIGLALRGPGDGALDDILRRADSALYAAKEAG 969
           AA     + +     PF   G +L    SIG+AL        + +L RAD+A+Y AK  G
Sbjct: 368 AAQACANKVLYAFAEPFDMEGLQLFAGTSIGIALYPDDADGAESLLSRADAAMYHAKRGG 427



 Score = 26.6 bits (57), Expect = 0.006
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 5/41 (12%)

Query: 380 AVEACGVGQFEVQFRLRAKGGDWKWMLARGRVLARREDGSP 420
           AVE  G+ + E  +RL A  G W      G    RR++  P
Sbjct: 194 AVEMIGLREIEEMWRLAANTGQWS-----GETWTRRKESEP 229