Pairwise Alignments

Query, 1000 a.a., diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 477 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  187 bits (476), Expect = 1e-51
 Identities = 123/307 (40%), Positives = 167/307 (54%), Gaps = 13/307 (4%)

Query: 680 QRRAAEAARQRSEAHY--RLLFEAAADAIFLHDPEGKFLDVNEVACRRLGYTRRELLAMT 737
           +RR  E   Q  EA      L E   + ++  DP+G     N       G    +     
Sbjct: 171 ERRVTERTCQLDEARRFAESLVELLPNPLWFTDPDGSLRLYNRAFREMFGVDSGDWHGQP 230

Query: 738 PRELDAEEFA--EQVGERIRRLREEGSLTFESAHRTRNGTVLPVEIHAKLLDFDGKPVV- 794
              +  +  A  +Q+ +   ++   G L FE++   ++G    V ++  L+  D +    
Sbjct: 231 THGVLPQPLAGLDQMADMSLKVGGPGGLAFEASLDHQDGQRTLV-VNKGLVRSDCRGTAD 289

Query: 795 -----LSIARDITDRKRLEQALMREATTDPLTGIRNRRQFFVDAEREMGRAVRYGRPLAV 849
                + I  DIT+RK +E  L   ATTD LTG  NRR FFV AE+E+ RA RYG  ++V
Sbjct: 290 EPMGTIGIVTDITERKHMESQLRHLATTDELTGCLNRRAFFVAAEQELERASRYGNAVSV 349

Query: 850 LMLDLDRFKRVNDRFGHHAGDAVLMGCVQACQQALRETDILGRLGGEEFAAVLLETDLDD 909
           LM+D+D FK+VNDR GH  GD  L     A +  LRE D  GRLGGEEFAA+L ET L  
Sbjct: 350 LMIDIDHFKQVNDRHGHAVGDKALKAATAAIRANLREIDSFGRLGGEEFAAMLPETTLAG 409

Query: 910 ALAAAERLRRAVEEMDVPFSGQR--LRCTVSIGLALRGPGDGALDDILRRADSALYAAKE 967
           AL  AERLR+AVE + +P    +  LR T S+G+A R PG+ A+D +L RAD+ALY AK 
Sbjct: 410 ALLVAERLRQAVEAIALPLGDDQPPLRLTTSLGVAERQPGEVAVDQVLARADTALYRAKA 469

Query: 968 AGRNRVM 974
            GRNRV+
Sbjct: 470 EGRNRVL 476