Pairwise Alignments

Query, 489 a.a., RND efflux system, outer membrane lipoprotein, NodT family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 503 a.a., efflux transporter outer membrane subunit from Paraburkholderia sabiae LMG 24235

 Score =  280 bits (716), Expect = 8e-80
 Identities = 182/505 (36%), Positives = 264/505 (52%), Gaps = 24/505 (4%)

Query: 2   LATAMLAATLA-GCSFGPDHARPAMDLPDAWRPG--------------TADTGTVQD-GW 45
           + TA+ AA  A GC+  P + RPA  +   +  G              TA+     D GW
Sbjct: 5   ILTALAAALFASGCTLAPTYERPAAPVAATYPKGGVYDNQPAKGTATRTANDQAATDIGW 64

Query: 46  WKGFGDPALDALVASALDHNRDLAKAIANVDEARAQLGLARANQMPRVDAQGASQRQRYS 105
            + F DP L  L+  AL +NRDL  +   VDEARAQ  + RA+ MP +   G   R R  
Sbjct: 65  REFFVDPRLQRLIELALQNNRDLRVSALKVDEARAQYRVQRADLMPSLSVDGTGTRTRTP 124

Query: 106 LEGFNSFDESTRVQDLHNAGGVLSYEMDLWGRYRRASEAARADLLSTMAARDTVRLALTA 165
            +   S+     V   +      S+E+D +G+ R  ++ A     ST  AR    + L +
Sbjct: 125 KD--LSYSGRATVGSDYQVAASASWELDFFGKVRSLTQQALQTYFSTAQARKAEEILLVS 182

Query: 166 QVARTYFDLRAYDQQLQVARDTLASRESTQELRKVRFELGLTSELDYRQAIAEAAAARST 225
           QVA  Y  L AYD+ LQ  ++T  +   + EL K++++ G  SELD R+A      A++ 
Sbjct: 183 QVADQYLTLVAYDEMLQSTKNTYDTARRSYELTKLQYDTGTGSELDLREAAGTMQQAQAN 242

Query: 226 VHTLQYNVSASEAALGVLTGKS-PRDIVTGTVERGLAVDAVPVPPSVPAGLPSALLERRP 284
             + Q + + +E AL +L G   P D+      +GL + +  +   +PAGLPS LL RRP
Sbjct: 243 YESQQRSRAQAENALVLLVGAPLPADL-----PQGLPLASQQLLADIPAGLPSDLLTRRP 297

Query: 285 DIVQAEQQLAAASANIGVAKAAYFPSISLTGLLGYESSDLTRLFTGPAGTWRYAGSVSMP 344
           DI++AE  L  A+ANIG A+AA+FPSISLTG  G  S+ L  LF      W +  ++S+P
Sbjct: 298 DIMEAEATLIGANANIGAARAAFFPSISLTGDFGTASASLGTLFKPGQLAWSFGPTISVP 357

Query: 345 IFDFGRIKAGVEAAEARQRAALAGYEKAVQDAFREAQDALVANRKARGVVEAQTTQVTAL 404
           IF  G  +A ++ A+     A+A YEKA+Q AFRE  D L A       ++A    V + 
Sbjct: 358 IFKGGENRANLDLAKLETNVAVAQYEKAIQTAFREVADGLAARGTYDRQIKALQENVESQ 417

Query: 405 RRSLHLAKLRYDNGYSSYLEVLDAERSLFDVEISLASAQRDQLVAVVEVYRALGGGWAGI 464
           +R   L+ LRY NG  SYL VL A+  L+  + SL +A  ++L  +V++Y+ LGGGW   
Sbjct: 418 QRRYDLSDLRYRNGVDSYLNVLTAQNDLYSAQQSLITASLNRLTNLVDLYQYLGGGWIEH 477

Query: 465 APLAPNAADAPEAPAQDGKPVAAAQ 489
           +   P AADAP A   +     A+Q
Sbjct: 478 SGDTPRAADAPYAQQSEQNTHVASQ 502