Pairwise Alignments

Query, 489 a.a., RND efflux system, outer membrane lipoprotein, NodT family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 517 a.a., efflux transporter outer membrane subunit from Paraburkholderia sabiae LMG 24235

 Score =  270 bits (691), Expect = 7e-77
 Identities = 190/501 (37%), Positives = 258/501 (51%), Gaps = 36/501 (7%)

Query: 3   ATAMLAATLAGCSFGPDHARPAMDLPDAWRPGTADTGT--------------------VQ 42
           A+ +L   LA CS  P + RP    P A++     T T                     +
Sbjct: 15  ASGLLMLLLAACSVEPTYNRPDAPTPAAFKEAPVTTTTDAAATPLPASEAGTWKTAEPAE 74

Query: 43  DG----WWKGFGDPALDALVASALDHNRDLAKAIANVDEARAQLGLARANQMPRVDAQGA 98
           D     WW  F D  L+ L   A D N+DL  A A V ++RA    ARA+  P +DA   
Sbjct: 75  DAHRGEWWIVFNDSTLNDLEKQAADANQDLKAAAARVQQSRALTQAARADWFPSLDAGFG 134

Query: 99  SQRQRYS-LEGFNSFDESTRVQDLHNAGGVLSYEMDLWGRYRRASEAARADLLSTMAARD 157
             R+R S    F   D     Q L  A    SYE+DL+GR      AARAD   + A   
Sbjct: 135 PTRERLSPASQFLPNDTHVPTQTLWRAQATASYEVDLFGRVSSNVNAARADQAQSEALFR 194

Query: 158 TVRLALTAQVARTYFDLRAYDQQLQVARDTLASRESTQELRKVRFELGLTSELDYRQAIA 217
           +V+LAL A VA+ YF LR +D QL + R T+  RE   +L + RF  G  +ELD  +A  
Sbjct: 195 SVQLALQADVAQNYFQLREFDTQLSLYRQTVTLREDALKLVERRFNEGDINELDVSRARN 254

Query: 218 EAAAARSTVHTLQYNVSASEAALGVLTGKSPRDIVTGTVERGLAVDAVPVPPSVPAGLPS 277
           E A AR+    +    +ASE +L +L GK P D      E  LA    PV   VPAGLPS
Sbjct: 255 ELATARADAVGVARQRAASEHSLAILLGKPPADF--AFPETPLA----PVTARVPAGLPS 308

Query: 278 ALLERRPDIVQAEQQLAAASANIGVAKAAYFPSISLTGLLGYESSDLTRLFTGPAGTW-- 335
           ALLERRPDI  AE+ +AAA+A +G+AK+A+FP + +TG  G+ES+ L  LF   +  +  
Sbjct: 309 ALLERRPDIAAAERAMAAANARVGLAKSAFFPKLDITGAFGFESATLGDLFQWSSRAFLL 368

Query: 336 -RYAG-SVSMPIFDFGRIKAGVEAAEARQRAALAGYEKAVQDAFREAQDALVANRKARGV 393
             +AG ++++PIFD GR KA +  A A+    +A Y + V  AFRE +D L   R     
Sbjct: 369 GPFAGTALTVPIFDGGRRKANLANARAKYDEDIAQYRQQVLVAFREVEDNLSDLRLLTDQ 428

Query: 394 VEAQTTQVTALRRSLHLAKLRYDNGYSSYLEVLDAERSLFDVEISLASAQRDQLVAVVEV 453
              Q   V A +R+ HL++ +Y  G  +YL+V+DA+R +   ++ L+     Q VA V +
Sbjct: 429 TREQNNAVNASQRAEHLSQTQYQEGQVAYLDVIDAQRQVLQSQLQLSHLAGTQAVATVNL 488

Query: 454 YRALGGGWAGIAPLAPNAADA 474
            RALGGGW G A      ADA
Sbjct: 489 IRALGGGW-GDAKTDVGNADA 508