Pairwise Alignments

Query, 489 a.a., RND efflux system, outer membrane lipoprotein, NodT family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 490 a.a., efflux transporter outer membrane subunit from Paraburkholderia sabiae LMG 24235

 Score =  360 bits (925), Expect = e-104
 Identities = 199/462 (43%), Positives = 289/462 (62%), Gaps = 7/462 (1%)

Query: 1   MLATAMLAATLAGCSFGPDHARPAMDLPDAWR-PGTADTGTVQDGWWKGFGDPALDALVA 59
           +L   + A TL+GC  GP+++RP +++P  +R P    +      WWK F DP L+ L+ 
Sbjct: 5   LLIGPLCALTLSGCLLGPNYSRPQVEVPATYRFPDNYASDVANTEWWKQFDDPVLNDLIT 64

Query: 60  SALDHNRDLAKAIANVDEARAQLGLARANQMPRVDAQGASQRQRYSLEGFNSFDESTRVQ 119
           +AL +N D+  A A VD+   Q    RA  +P VDA   ++RQR         + ++ V 
Sbjct: 65  TALANNNDVKVAAARVDQFLGQFVTTRAALLPHVDAGFDAERQRIPTTSPLFSNITSPVF 124

Query: 120 DLHNAGGVLSYEMDLWGRYRRASEAARADLLSTMAARDTVRLALTAQVARTYFDLRAYDQ 179
           + +      S+E+DL+G  RR +EAARA LLST  A+    L L + VA +Y +LR+ D+
Sbjct: 125 NSYQLALSASWEIDLFGHNRRLTEAARASLLSTEEAKRGTILTLVSSVASSYINLRSLDR 184

Query: 180 QLQVARDTLASRESTQELRKVRFELGLTSELDYRQAIAEAAAARSTVHTLQYNVSASEAA 239
           QL++A+ T +SR  +  + ++RF+ G  S+++  Q+ +E   +RS +  ++  ++  E A
Sbjct: 185 QLEIAKATTSSRAESVHVFELRFKGGEVSQMELAQSQSEYEDSRSRIPQIESQIAQQEDA 244

Query: 240 LGVLTGKSPRDIVTGTVERGLAVDAVPVPPSVPAGLPSALLERRPDIVQAEQQLAAASAN 299
           L VL G++P DI+ G     LA       P+VPAGLPS LLERRPD+ QAEQ L +A+A 
Sbjct: 245 LSVLLGRNPGDILRGRALGELAA------PAVPAGLPSDLLERRPDLRQAEQDLVSANAQ 298

Query: 300 IGVAKAAYFPSISLTGLLGYESSDLTRLFTGPAGTWRYAGSVSMPIFDFGRIKAGVEAAE 359
           IG AKA YFP IS+TGLLG +S   ++LFTGPA  W +AGSV+ PIF+ G I   V+ AE
Sbjct: 299 IGAAKALYFPQISITGLLGTQSGQFSKLFTGPARVWSFAGSVTQPIFEGGAIAGQVKQAE 358

Query: 360 ARQRAALAGYEKAVQDAFREAQDALVANRKARGVVEAQTTQVTALRRSLHLAKLRYDNGY 419
           A Q+ AL  Y KA+Q AF+E  DAL++++K R   + Q  QV AL    H+A+LRY+ GY
Sbjct: 359 AVQQQALYSYRKAIQVAFQEVDDALISSQKLREQFDIQGRQVEALATYAHMARLRYEGGY 418

Query: 420 SSYLEVLDAERSLFDVEISLASAQRDQLVAVVEVYRALGGGW 461
           +SY+EVLDAERSLF+ ++S    Q   LV+ V +Y+A+GGGW
Sbjct: 419 TSYIEVLDAERSLFNAQLSQTQTQAGVLVSYVSLYKAMGGGW 460