Pairwise Alignments

Query, 812 a.a., DNA gyrase, A subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 752 a.a., DNA topoisomerase IV subunit A from Pseudomonas putida KT2440

 Score =  394 bits (1011), Expect = e-113
 Identities = 262/737 (35%), Positives = 405/737 (54%), Gaps = 66/737 (8%)

Query: 13  KSYLEYSLSVIIGRAIPDARDGLKPVHRRIMFAQHELGNGYTRPPKKSARVVGDVIGKYH 72
           ++YL YS+ VI+ RA+P   DGLKPV RRI++A  ELG       KKSAR VGDV+GK+H
Sbjct: 23  QAYLNYSMYVIMDRALPHIGDGLKPVQRRIVYAMSELGLDADAKHKKSARTVGDVLGKFH 82

Query: 73  PHGDSAVYDALVRMAQDFSMRDPLVDGQGNFGSIDGDAA-AAMRYTEVRMSRLAGEFLAD 131
           PHGDSA Y+A+V MAQ FS R  LVDGQGN+G+ D   + AAMRYTE R+SR A   L++
Sbjct: 83  PHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPDDPKSFAAMRYTEARLSRYAEVLLSE 142

Query: 132 IDKETVDFRPNYDNTLLEPSVLPTKVPNLLLNGSSGIAVGMATNIPPHNLGELCGALLHI 191
           + + TVD+ PN+D TL EP+VLP ++PN+LLNG++GIAVGMAT++PPHNL E+  A + +
Sbjct: 143 VGQGTVDWVPNFDGTLQEPAVLPARLPNILLNGTTGIAVGMATDVPPHNLREVASACVRL 202

Query: 192 VDEPGCTVEDLMDHVKGPDFPT-AGFVYAGQGLYDAYTTGRGTVKVRGKVEIEERKKGLQ 250
           +DEP  T+E L +H++GPD+PT A  V     +   Y +GRG++++R    +E+      
Sbjct: 203 LDEPKATIEQLCEHIQGPDYPTEAEIVTPRAEILKMYESGRGSIRMRAVYRVEDGD---- 258

Query: 251 AIVIREIPFALNKSSLVEKIAALVNERKIDGVADLRDESDRKGIRVVIDLKRGTIPDI-- 308
            IV+  +P  ++ + ++E+IAA +  +K+  VADLRDESD +    ++ + R    D+  
Sbjct: 259 -IVVTALPHQVSGAKVLEQIAAQMQAKKLPMVADLRDESDHENPCRIVIIPRSNRVDVDE 317

Query: 309 VVNALYKYTPLESSFGINMLAV-VGNRPQLLNLKQALEIFLEHRREVIIRRTRYDLRKAE 367
           ++  L+  T LES++ +N+  + +  RPQL NL+  L  +LE R   + RR ++ L K E
Sbjct: 318 LMQHLFATTDLESTYRVNVNIIGLDGRPQLKNLRTLLVEWLEFRTNTVRRRLQHRLDKVE 377

Query: 368 ARAHILEGLRIALDNIDEVVALIRASKTPQDAKDALMGRFTLSEAQAQAILDMRLQRLTN 427
            R H+L+GL  A  N+DEV+ +IR  + P   K AL+ RF L+E QA  IL+ RL++L  
Sbjct: 378 KRLHLLDGLLTAFLNLDEVIHIIRTEEYP---KQALIERFELTEIQADYILETRLRQLAR 434

Query: 428 LEHEKLIEEYNELLKKIEFFRSVLENPEVLRSVIREEIGELRDTFATKRRTEVL-EEELD 486
           LE  K+  E +ELLK+    +++L +   LR ++R E+ +  +T+   RR+ ++   E  
Sbjct: 435 LEEMKIRGEQDELLKEQAKLQALLGSEAKLRKLVRSELIKDAETYGDDRRSPIVARAEAK 494

Query: 487 GIDIEDLIPDEDVVITLSRRGYI---KRTTLDNYQQQRRGGKGIAGVHTSEDDFVQDFLT 543
            +   +L+P E V + LS +G++   K   +D      + G G                 
Sbjct: 495 ALSENELMPTEPVTVVLSEKGWVRCAKGHDIDATGLSYKAGDGFKAAAAGR--------- 545

Query: 544 TTNHQYLLLFTNHGRMHQIKVHRVPE---------GSRTAKGVHIANLVQLDKDELVTNV 594
             ++Q+ +L  + GR + +  H +P          G  T         V L  D+ +  V
Sbjct: 546 --SNQFAVLIDSTGRSYSLAAHSLPSARGQGEPLTGRLTPPPGATFECVLLPDDDALYVV 603

Query: 595 LTVREFAEDRYFLFVTRRGMVKRSSASLYAKCRKTGLIAVGLRPDDELIMVREV--DEHC 652
                 A D  + FV +          L AK  K G   + L    +++  R V   E  
Sbjct: 604 ------ASDAGYGFVVK-------GEDLQAK-NKAGKGLLSLPNGAKVMTPRPVADREQD 649

Query: 653 HIVLTTGDGMAIRFQCEDVRPMGR----SATGVKGIALRGKDRVVACVILAEEDTTSMIM 708
            +   T +G  + F+  D+  +G+       GV G  +  ++  V  + +  E  T ++ 
Sbjct: 650 WLAAVTTEGRLLVFKVSDLPQLGKGKGNKIIGVPGDRVASREEFVTDLAVIPEGATLVLQ 709

Query: 709 SVSANGFGKRT---KAD 722
           +      GKRT   KAD
Sbjct: 710 A------GKRTLSLKAD 720