Pairwise Alignments
Query, 812 a.a., DNA gyrase, A subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F
Subject, 923 a.a., DNA gyrase, subunit A from Pseudomonas putida KT2440
Score = 756 bits (1952), Expect = 0.0
Identities = 408/879 (46%), Positives = 565/879 (64%), Gaps = 83/879 (9%)
Query: 5 VSIEKELRKSYLEYSLSVIIGRAIPDARDGLKPVHRRIMFAQHELGNGYTRPPKKSARVV 64
V+IE ELR+SYL+Y++SVI+GRA+PDARDGLKPVHRR+++A ELGN + +P KKSARVV
Sbjct: 11 VNIEDELRQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWNKPYKKSARVV 70
Query: 65 GDVIGKYHPHGDSAVYDALVRMAQDFSMRDPLVDGQGNFGSIDGDAAAAMRYTEVRMSRL 124
GDVIGKYHPHGD+AVYD +VRMAQ FS+R LVDGQGNFGS+DGD AAAMRYTEVRM++L
Sbjct: 71 GDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAMRYTEVRMTKL 130
Query: 125 AGEFLADIDKETVDFRPNYDNTLLEPSVLPTKVPNLLLNGSSGIAVGMATNIPPHNLGEL 184
A E LAD+ KETVD+ PNYD T P+V+PT++PNLL+NGSSGIAVGMATNIPPHNLGE+
Sbjct: 131 AHELLADLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMATNIPPHNLGEV 190
Query: 185 CGALLHIVDEPGCTVEDLMDHVKGPDFPTAGFVYAGQGLYDAYTTGRGTVKVRGKVEIEE 244
L ++D P T+++LM H+ GPDFPTAG + QG+ +AY TGRG + +R + EIE+
Sbjct: 191 IDGCLALIDNPEVTIDELMQHIPGPDFPTAGIINGRQGIIEAYRTGRGRIYMRARSEIED 250
Query: 245 RKK--GLQAIVIREIPFALNKSSLVEKIAALVNERKIDGVADLRDESDRKGIRVVIDLKR 302
K G Q IVI E+P+ LNK+ L+EKIA LV E+KI+G+ +LRDESD+ G+R+VI+L+R
Sbjct: 251 IDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKIEGITELRDESDKDGMRIVIELRR 310
Query: 303 GTIPDIVVNALYKYTPLESSFGINMLAVVGNRPQLLNLKQALEIFLEHRREVIIRRTRYD 362
G +P++V+N LY+ T L+S FGIN++A+V RP+LLNLK LE F+ HRREV+ RRT ++
Sbjct: 311 GEVPEVVLNNLYQQTQLQSVFGINVVALVDGRPRLLNLKDLLEAFVRHRREVVTRRTVFE 370
Query: 363 LRKAEARAHILEGLRIALDNIDEVVALIRASKTPQDAKDALM------------------ 404
LRKA R HILEG +AL NID V+ALI+AS TP +AK+AL+
Sbjct: 371 LRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALVSTPWESSAVQVMVERAGA 430
Query: 405 ----------------GRFTLSEAQAQAILDMRLQRLTNLEHEKLIEEYNELLKKIEFFR 448
G++ LS QAQAILD+RL RLT LEHEKL+ EY E+L++I
Sbjct: 431 DSCRPEDLPEQYGLHDGKYFLSPEQAQAILDLRLHRLTGLEHEKLLAEYQEILEQIGELI 490
Query: 449 SVLENPEVLRSVIREEIGELRDTFATKRRTEVLEEELDGIDIEDLIPDEDVVITLSRRGY 508
+L + E L VIREE+ +R + RRTE+L D ++ D+IP+E+ V+T+S GY
Sbjct: 491 RILSSAERLMEVIREELEAIRAEYGDVRRTEILNASHD-LNYGDMIPEEERVVTISHGGY 549
Query: 509 IKRTTLDNYQQQRRGGKGIAGVHTSEDDFVQDFLTTTNHQYLLLFTNHGRMHQIKVHRVP 568
K L YQ QRRGGKG + ++D+++ L +H LLLF++ G+++ K + +P
Sbjct: 550 AKTQPLSAYQAQRRGGKGKSATGVKDEDYIEHLLVANSHATLLLFSSKGKVYWKKTYEIP 609
Query: 569 EGSRTAKGVHIANLVQLDKDELVTNVLTV--------------REFAED----------- 603
E SR A+G + NL+ L++ E +T +L + + AED
Sbjct: 610 EASRAARGRPLVNLLPLEEGERITAMLQIDLEALQQNADLDEELDEAEDTVLEGELVEAE 669
Query: 604 ------------------RYFLFVTRRGMVKRSSASLYAKCRKTGLIAVGLRPDDELIMV 645
Y T G VK++ +A+ R GLIA+ L+ D LI
Sbjct: 670 EVDEEDGDTPEWVAEPTGAYIFMATASGTVKKTPLVQFARPRSNGLIALKLKEGDTLIAA 729
Query: 646 REVDEHCHIVLTTGDGMAIRFQCEDVRPMGRSATGVKGIALRGKDRVVACVILAEEDTTS 705
D +++ + G IRF VR MGR+A GV+G+ L R+++ +I ++ S
Sbjct: 730 AITDGAKEVMMFSDAGKVIRFAESVVREMGRNARGVRGMKLGKGQRIISMLI---PESGS 786
Query: 706 MIMSVSANGFGKRTKADLYRVQSRGGVGVKNFKVTPKTGDVIGAMPVRDDDALVLLTSTN 765
I++ S GFGKRT + + RGG GV + G +IGA+ V++ + ++L++
Sbjct: 787 QILTASERGFGKRTPLSKFPRRGRGGQGVIAMGTKGRNGLLIGAIQVQEGEEIMLISDQG 846
Query: 766 KILRMGLNDVRSVGRATQGVRLVRLDEGALVVGFDRIDE 804
++R + +V S+ R TQGV L++L +VG +RI E
Sbjct: 847 TLVRTRVGEVSSLSRNTQGVTLIKLAADETLVGLERIQE 885
Score = 48.9 bits (115), Expect = 1e-09
Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 490 IEDLIPDE-DVVITLSRRGYIKRTTLDNYQQQRRGGKGIAGVHT-SEDDFVQDFLTTTNH 547
I LIP+ ++T S RG+ KRT L + ++ RGG+G+ + T + + +
Sbjct: 777 ISMLIPESGSQILTASERGFGKRTPLSKFPRRGRGGQGVIAMGTKGRNGLLIGAIQVQEG 836
Query: 548 QYLLLFTNHGRMHQIKVHRVPEGSRTAKGVHIANLVQLDKDELVTNVLTVREFAED 603
+ ++L ++ G + + +V V SR +GV L++L DE + + ++E +ED
Sbjct: 837 EEIMLISDQGTLVRTRVGEVSSLSRNTQGV---TLIKLAADETLVGLERIQEPSED 889